Pimephales promelas (fathead minnow): 120484601
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Entry
120484601 CDS
T08155
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120484601
04121 Ubiquitin system [BR:
pprm04121
]
120484601
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120484601
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120484601
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
hAT-like_RNase-H
DPOA2_OB
MVD-like_N
Motif
Other DBs
NCBI-GeneID:
120484601
NCBI-ProteinID:
XP_039535814
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MRPIAVVEGQGFKNLLKVLEPGYTVPARHTITNALTAKYEGLKDKVSALIQQSEALSLTT
DMWTSLRMESYMTVTAHFIDGDWKAQSLVLETKQMEEAHTGINIAARLSEVADTFGIQGK
IVSVVCDNAANMTLCVETLKESHKWAEMQGVRCAGHTLQLCINAALKQDPICRAVAASRH
LVGHFKKGHKAKTGLKQKQEQQNVPQHELIQDVSTRWNSTFSMLERLLEQRWPITAVLSD
PNFTKKSDSSTLDLTTAHWNAIEDIKNVLKPMTTLTELLSEEDNASLSATVPMLANLKKR
HLAIADDDSPITKKMKSKLVEEIDGRWEFKNRMMMTNSVYITAAVVDPRFKQLSFLDDAK
RDEAYIVVAQLAERLNAVTGTGEPGSEEEQHVSKKQKNDKEKEIAMLLCEDEDDLISRES
GGRSRVTEEMKNYLQDRTKIDSGPLGWWKKNQDRYPSLARVAKRLLCIPATSTPSERIFS
KAGFIVNKARSCLLPKNVDMLVFLAHNTKKCGMDIDCTVSE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccattgctgttgtggagggccaaggttttaagaacttgctaaaagttttggaa
cctggttatacagtgccagcacgccacacaatcactaatgcgctaaccgcaaaatatgag
ggactcaaagacaaagtgtctgcgttaatacaacagagcgaggcactgagtttgaccaca
gatatgtggacatctctgagaatggagtcctatatgacagtgactgcccatttcattgat
ggagactggaaagcacagagtcttgtgcttgagacaaaacaaatggaagaggcgcacacg
ggaataaacattgctgcacgactatctgaagttgcggataccttcggaattcaaggaaag
atagtttctgttgtatgtgacaacgcggctaatatgacactctgtgtggaaacactaaag
gaatcacataaatgggcagagatgcagggcgtcaggtgcgccgggcacactttgcagctc
tgtattaacgctgcactcaaacaagatccaatttgtcgtgccgtggctgcatcacgtcat
ctggtgggacatttcaaaaaggggcacaaagcaaaaactggactaaaacagaagcaggag
cagcaaaacgtccctcagcatgaattaattcaggatgtgtcgacacgttggaactcaaca
ttttcaatgttggagcgactgctggagcaacgctggcctattaccgcagtgctgtctgac
ccaaactttacaaagaagagcgacagcagtacactggaccttaccactgcacactggaat
gcgatagaggacattaaaaatgtgctgaaaccgatgacaaccttgaccgagctgctgtct
gaagaggacaacgcatccctgtctgcaacagtacccatgctagcaaacttgaagaaacgt
cacctggccatcgcggatgatgacagccccattaccaaaaaaatgaaaagcaagctggtc
gaagaaattgacggtagatgggagtttaaaaaccgaatgatgatgactaacagtgtatac
attacagctgcagtagtagaccctcgttttaagcagctgtcttttctggatgatgccaaa
cgagacgaggcctatatagtagttgcacagctggcagaacgtctgaatgcagtcacaggc
acaggtgaacctggaagtgaggaggagcaacatgtgtcaaaaaagcagaaaaacgacaaa
gagaaggagattgctatgctgttgtgcgaagacgaagacgatctgatttctagagaatcc
ggtgggagaagcagagtgacagaagaaatgaaaaactatcttcaggacagaaccaaaatc
gactccggaccattgggttggtggaaaaaaaaccaagacagatacccgagcctagcccga
gttgcaaagcgactgctctgtatacctgcaacttccacgccgtctgaacgcattttctcc
aaggctggatttattgtcaataaagcaagaagttgtctccttccaaagaacgtggatatg
cttgtgtttctcgcacacaacacaaaaaagtgtggaatggacattgattgtactgtaagt
gagtag
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