Pimephales promelas (fathead minnow): 120484629
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Entry
120484629 CDS
T08155
Symbol
clstn3
Name
(RefSeq) calsyntenin-3
KO
K22661
calsyntenin 3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120484629 (clstn3)
Cell adhesion molecules [BR:
pprm04515
]
Cadherins
Cadherin related
120484629 (clstn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
120484629
NCBI-ProteinID:
XP_039535849
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MARMSFLSFLLFCLTSVAHGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPGGSGSAQFEAVVLDRSTGEGLVRSKEPLDCESQKEHSFTIQAYDC
GEGPDGTNSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEAVDADCS
PQYSQICFYDIITPNVPFTIDNDGNIKNTEPLDSKRQRVHSFWVTAFDCGKNRAQADAQV
IVTVKPSCKPGWIGWTKRIEYTPGSGSIPLFPNLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPATNWTAALPTLPSSDSSLVFSFNGSTHVAV
VPDSVASAVSGDHFTLQLWMRRGGASTQPLANQARGTRKEEETIVCSTVKNDDTYSHYSL
SVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPAL
IHDNGAIPNPAPHQRLVIGACWEPEEKSKDIVNNTMPESKDTGKFVSGYKGLLSGVTVRP
GNVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVT
YRNSLRFATPGVRPLKLTTSLRCFSEESCLSLRQLEGYLVVLQPDAPQISLSGVGPHLAR
PAAEFEGPQGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEEL
NPEREELLVDMEALRERGLDIINTTAYIAITGAESISVYEDVLRSIRYRLAKGSARFERR
FRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHTGELSGHTLPN
PHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGDGARGGGKEGSNQWDDSALT
IIVNPMETYENRMGIATDIDGECDDEEEVVDSPDDTSDDQRIIIKKEGRDSAPRRY
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggccagaatgagttttctctcctttctcctcttttgcttgacttcggttgcccatggc
aacaaagccaataaacacaagccatggatcgagacggagtaccaagggatcgtcatggaa
aacgacaacactgtcctcctcaaccctcctctgttcgccctggataaagacgcaccgctg
cactatgcaggggagatctgtgggtttagggttcataacggaccgggtggttctggttcg
gcacagtttgaggccgtggtgttggaccgctccactggagaaggtctggttcggtccaaa
gagcctctggactgtgaaagccagaaggagcacagcttcaccatccaggcctatgactgc
ggtgaaggtcctgacggcaccaacagcaagaaatcccataaggccaccgtgcacgttcgt
gtaaatgatgtgaacgagttctctcccgtctttgtggagcgtcggtatgaggcgtctgtg
cctgagggtcgtctgtttgatcgtattgtgcgggtggaagccgtggatgccgactgctcc
ccacagtacagccagatctgcttctatgacatcatcacacccaacgtccctttcaccatt
gataacgatgggaacataaagaacactgagcctctggactccaaacgccagcgtgtccac
agtttctgggtgaccgcattcgattgtgggaagaatcgagctcaggctgatgctcaagtc
atagtcacagtcaagccttcctgcaagccaggctggatcggatggacaaagcgcatcgag
tatactcccggttcgggcagtatccctctctttccgaacctgcacttagagacctgcgag
gagacggtttggaacatccaggctacggttgagcttcagacgggtcatattgggaagggc
tgtgacagggacagctactccgatcgatctgtgcgcagactctgtggtgctgtgaggggt
gaagtcgacctccttccacctccatcccctgcaaccaattggaccgccgcgctaccgact
ctaccgtcctctgattcatccctggtcttctccttcaatggctccacccatgttgctgtt
gtacctgattcagttgcttcagcagtatccggcgaccacttcaccctgcagctctggatg
cgaagaggaggtgccagcactcaaccactggccaatcaggcgaggggaacccgtaaagag
gaggagactattgtctgcagcactgtaaagaatgatgacacatactctcattactcttta
tcggtgcatggctgtcgtctctctctcttctattggccggatgtgtccgctgcaagaccc
gtcaaattcctttggaaactggaacaggtgtgtgacagtgagtggcatcacttgtccctt
agtgtgcagttcccctctgtcacactatatgtggatggtgtgacctttgaccctgcactc
atccatgacaacggagctatccccaaccccgcaccacaccaacggctggtcatcggagca
tgctgggagccagaagagaaatcgaaagacatcgtgaacaacaccatgccagagagtaaa
gacacagggaagtttgtcagtggttacaaagggcttttgtcaggagtaacagtgcgtcca
ggaaatgtggagccacacagtgtagtggagtgcctgtatgcctgtcgagagggccttgat
ttcggagaccttgagactttgggctcaggcatgaaggtgcacgtgaaccctagccagtct
gtactggtgttagagggagacgacattgaaagtttcaaccgtgctgttcagcaggtgaca
tacaggaactctctacgatttgccacccctggtgtacgtccgctcaaactcaccacctct
ctgaggtgtttcagtgaagagagctgtctctctctcagacagcttgagggttacctggtc
gtgctccagcctgacgccccgcagatctctctgtctggggtgggaccccacctggcccga
ccagccgctgaatttgagggtcctcaaggggttcccttgtttcctgagctccgtatcgtc
tgctccttgtcccatgctgtgaacacagctgctcagggcatggaaggaggggcactgatg
tcagatgctgtggctcacactctggatggatgtgaagttcagcccttgggggaggagcta
aacccagaaagggaggagcttttggttgacatggaggcgttaagagagagagggctggac
atcattaacacaacggcctacattgccatcactggagcggagtctatctctgtgtatgag
gatgtgttgcgctccattcgctatcgcttagcaaagggctctgctcgttttgaaagaaga
ttccgtctgtcgtgctcagaaatgaacggccggtacacaagcaacgagctcacgctggag
gtaaacttcctgcattctctggacagtctgtaccatccgtctcacctgctggcgtctcag
cagcagttcctccacccatcccatcacaccggggaactgagtggacacacactccccaat
ccacaccgcaactcagttgttccaggagctgcaactgtcatcatcatggtgtgtgtgggt
ttcttggttgtcatggtgattcttggtgtttttcgcatccgttccatccaccgtcgtggt
gacggagcaagaggcggaggcaaagagggcagcaaccaatgggatgattctgccctcacc
atcattgtgaacccaatggagacatacgagaaccgcatgggtattgcaacagatattgac
ggagagtgtgatgatgaggaagaagtagtggattcgcccgatgataccagtgatgaccaa
cgaatcatcatcaagaaagagggaagagactccgcccccagacgctactga
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