Pimephales promelas (fathead minnow): 120484643
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Entry
120484643 CDS
T08155
Symbol
dync1i1
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04145
Phagosome
pprm04814
Motor proteins
pprm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120484643 (dync1i1)
09142 Cell motility
04814 Motor proteins
120484643 (dync1i1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120484643 (dync1i1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120484643 (dync1i1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120484643 (dync1i1)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
120484643 (dync1i1)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
120484643 (dync1i1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Dynein_IC2
Beta-prop_EML
WDR55
WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
120484643
NCBI-ProteinID:
XP_039535873
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MRLRLSNTTMAERSDLKAELERKKQRLAQIREEKKRKEEERKKKDSEILQRTENVSEDSD
LDRKRRETEALLQSIGISPEPPLVQPLQLLTWDTCYFHYLVPTPMSPSSQSVSPVSETGS
QESIDGGTVGRYRTLQWDTDPLALQLLADSVHGCKMQRLGASKIVQIDFIPKELVTYSKE
TQTPVATDQPEEDEDEELSVPKSEPVPQQLEEEKLQEDEEVHPRELTNEEKEQIVHSEDF
LFFFDRSIRVVERVLAEDSDIFFDYSGRDMEDKEGDMQAGSNLSFNRHFYDEHWSKHRVV
TSLDWSPQYPELLVASYNTNEDAPHEPDGVVLVWNMKFKKMTPEYIFHCQSSVMSVGFAQ
FHPNLVIGGTYSGQIALWDNRSHRRTPVQRTPLSATAHTHPVYCVNVVGTQNANNLITVS
TDGKMCSWSLDMLSQPQESMELIYNKSKPVAVTCMAFPASDVNNYVVGSEEGTVYTASRH
GSKAGIGEMFDGHQGPVTGISCHNSVGPVDFSHLFTTSSFDWTVKLWSTKHNKPLYSFED
NADYVYDVMWSPVHPALFATVDGNGRLDLWNLNNYTEVPSASVTVEGGCALNRVRWATGG
REVAVGDSEGRVWIYDVGEQLATSHTDDWSKFARTLMEIRANRGDGEEESALELPA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgagactgagattgagcaacacaacgatggctgaaagaagtgacctaaaagctgagctt
gagcgcaaaaagcagcgcttggcccagattcgagaggagaagaaacgaaaggaggaagag
agaaagaagaaagattctgagatccttcagaggactgaaaacgtgtcagaagactcagac
ctagacaggaagagaagagagacagaggctctcctgcagagcattggaatttcacctgaa
ccacctctagtgcagccactgcagcttttaacatgggatacctgttattttcattattta
gtcccaacccctatgtctccctcttcgcaatcagtgagcccggtcagtgaaactggaagt
caagagtccatagatggagggacagtgggaagatatcggacgttgcaatgggacaccgac
cccttagctcttcagcttcttgcagattctgttcatgggtgcaagatgcaaaggcttgga
gcatcaaaaattgttcagattgatttcataccaaaagaactggtgacatactctaaagag
acacagacgcctgtcgcaactgatcagcctgaggaggatgaggatgaggagctgtccgtg
cccaaatctgagccagtgccacagcagctagaggaggagaagcttcaggaagatgaagaa
gttcatcctagagaactcaccaatgaggagaaagagcagattgttcattcagaggatttc
ctgtttttcttcgaccgaagcatccgtgtagtggagcgagtgctggccgaggattcggac
attttctttgactacagtgggcgagatatggaggacaaagaaggggacatgcaagccgga
tcaaacttgtcttttaatcgacatttctatgatgagcattggtctaaacatcgagtcgtc
acttccctggattggtcaccacagtatcctgaattgctagtggcctcatacaacactaat
gaggatgcgcctcatgagccagatggagttgtgctggtctggaatatgaagtttaagaag
atgacccccgagtacatattccactgtcagtcctcagtgatgtcagtcggctttgctcag
tttcatcctaatctagtgatcggaggcacttattcaggacagatagcactgtgggacaat
cgaagtcacaggaggaccccagtgcaaaggacgcctctgtctgcaactgcacacactcat
cctgtatactgtgtgaatgtggtcggaacacaaaatgccaacaacctgatcacagtttcc
acagatggcaagatgtgctcctggagtctggacatgctctcacagcctcaggaaagtatg
gagctgatctacaacaagtcaaagcctgtggcagtcacttgcatggcctttcctgcaagc
gatgtgaataactatgtggtaggaagtgaggagggcaccgtttacacagcatcccgccac
ggaagtaaggctggtattggtgaaatgttcgatgggcatcaggggcctgtgactggaatc
agctgccataactctgtgggtccagttgacttctcccatctctttaccacttcctcattt
gattggactgtcaaactgtggtcaaccaaacataacaagcccctctattcttttgaagac
aatgcagactatgtgtatgatgtcatgtggtctccagttcatccagcactctttgctaca
gttgatggcaatggtcgtctggacctctggaatctcaacaactacacagaggtgccgtcg
gcaagtgtgactgtggagggaggatgtgctctgaaccgggtcagatgggcaacgggaggc
agagaggtggcagtgggtgattcagaaggccgtgtttggatctatgatgtgggagagcag
ttggccacgtcacatacagacgattggagcaaatttgcccgtacgctcatggagattcgt
gccaaccgaggggatggagaggaagaaagtgctttggagctgcctgcatga
DBGET
integrated database retrieval system
