Pimephales promelas (fathead minnow): 120484681
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Entry
120484681 CDS
T08155
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2 isoform X1
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120484681
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
120484681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF7780
SOG2
Motif
Other DBs
NCBI-GeneID:
120484681
NCBI-ProteinID:
XP_039535936
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MDEPPCLPSDSCSGEPRVDCNKSAPCLVDTRVEGKTGKNKKHKKRRSAACQRKTGGGYTP
VTVEELSPPSHPPEHHEKRSAGSKQEKNTRKTKNHSISHETSPALSSHRQKAQSAQKTSS
LSTCDQSTQTESPQLQSLQTQSTQTSPTQGEHTPSTESKSTQTKQSSFPLKQAYWGKSFT
DQSADQQKPQLSSRNSYLTVISWNIDGLDLDNVFDRLKGLLSLLGKYRADVVLLQELIPP
TFEILQNTMTDYQFLQASEVGYFTAILLRKERVQLLQSNIVKYPTTEMGRNLLVANVSFL
GHPLCIMTSHLESCKTGSQERLNQLRRVWKWMKEAPGDHSVIFGGDTNLRDWEVVTKLNG
LPDSISDVWEMLGKSEESRYTWDTSINDNKEIPNSIRLRFDRIFLRSATEGAQLRPESMT
MIGLRKLKCDYFISDHWGILCTFTFEASEE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggatgagccaccttgtttaccgagtgattcctgctcaggagagccccgtgtggactgt
aataaaagtgctccatgtcttgtggacaccagagttgaggggaaaactgggaagaataaa
aagcataaaaagagacgcagtgctgcatgccaaaggaaaacaggtggtggttatactccg
gtcactgttgaagagctttcgccaccctcacacccgcccgagcaccacgaaaaaaggtct
gcaggatcaaagcaagaaaagaatactcgcaaaactaaaaatcattctatttcacatgaa
acttctcctgcactctcctctcatcgacaaaaagcccaaagtgcacagaaaacatcatct
ctgtctacctgtgaccagtcaactcagacggagtcaccccaactccaatctctccaaacg
cagtcaacacaaacctctccgacccagggtgaacacacaccgtcaacagaatccaagtcc
acccagacaaaacagtctagttttccgttaaaacaggcatactgggggaaatcattcaca
gatcagtcagctgatcagcagaaaccccaactcagctccagaaacagctatctgacagtc
atatcctggaatatagacggtctggatctggataatgtctttgaccggctcaaaggtctg
ctgtcactcttaggaaagtaccgtgcagatgttgtactgttacaagagctgattcctcct
acttttgagattttacagaacactatgacagattatcagttcctgcaagccagtgaagtg
ggctatttcactgccattttgctcagaaaggaaagagtacaattgctccagagcaacatt
gtgaagtacccaaccacagagatgggcaggaacctgctagttgcaaatgtgagcttttta
ggccatccactgtgcattatgacatctcatctggagagctgcaagacaggttctcaagaa
cgcctgaatcagctgcggagagtctggaaatggatgaaagaggctccaggggaccattca
gttatatttggaggagatactaacctcagggattgggaggttgtgacgaagctcaatggg
ctgccggacagtatctctgatgtttgggagatgctagggaaatcagaggaaagcagatac
acctgggacacatccattaatgataacaaagaaatccctaattctatacgcttgcgattt
gatcgaattttcctcagatcagccacagaaggtgcccagctacggccagaaagcatgacc
atgattggtctgaggaagctgaagtgtgactatttcatcagcgatcactggggcattctt
tgtactttcacatttgaggcatcagaagagtag
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