KEGG   Pimephales promelas (fathead minnow): 120484688
Entry
120484688         CDS       T08155                                 
Symbol
rab13
Name
(RefSeq) ras-related protein Rab-13
  KO
K06109  Ras-related protein Rab-13
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04530  Tight junction
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    120484688 (rab13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pprm04131]
    120484688 (rab13)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pprm04147]
    120484688 (rab13)
   04031 GTP-binding proteins [BR:pprm04031]
    120484688 (rab13)
Membrane trafficking [BR:pprm04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    120484688 (rab13)
Exosome [BR:pprm04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120484688 (rab13)
  Exosomal proteins of colorectal cancer cells
   120484688 (rab13)
GTP-binding proteins [BR:pprm04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    120484688 (rab13)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB MMR_HSR1 PduV-EutP RsgA_GTPase AAA Septin AAA_7 FeoB_N TniB AAA_22 AAA_16
Other DBs
NCBI-GeneID: 120484688
NCBI-ProteinID: XP_039535949
LinkDB
Position
Unknown
AA seq 200 aa
MAKKYDFLYKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKVKLQ
VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKGIKENASAGVSRMLLG
NKCDIETKRKVSTEVGEKLAKEHGIRFFETSAKSSINVEESFASLARDILLKSNKKSGPS
GQEVKITNSTEKKSSKCLLL
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcaaagaaatacgacttcctctataaattattgcttattggcgatagtggtgttggc
aagacctgtctgatcatccgtttcgcagaagacaattttaattcaacgtacatatcaacc
atcggtattgacttcaaagtgaagactattgaggttgatgggaagaaagttaaactgcaa
gtctgggacacagcgggacaggagaggtttaagaccatcactactgcatactacagaggg
gcaatgggcatcatccttgtgtatgacatcactgatgaaaaatcttttgagaatattcag
aactggatgaagggcatcaaagaaaatgcatccgcaggtgtaagtcggatgttactgggt
aacaagtgtgatatcgagaccaagcggaaagtgtcaacggaggtgggtgagaagcttgca
aaggaacatggtattcgattttttgagactagtgcaaaatcgagcatcaacgttgaggag
tcttttgcttctcttgctcgagacattttgctgaagtcaaataagaagtcgggtccatct
ggccaagaggttaaaattactaacagcacagagaaaaagtcctccaagtgtcttcttctt
tag

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