Pimephales promelas (fathead minnow): 120484741
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Entry
120484741 CDS
T08155
Symbol
rnf115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120484741 (rnf115)
04121 Ubiquitin system [BR:
pprm04121
]
120484741 (rnf115)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120484741 (rnf115)
Membrane trafficking [BR:
pprm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
120484741 (rnf115)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120484741 (rnf115)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-RING_5
zf-Nse
zf-ANAPC11
zf-C3HC4_3
DUF8608
C1_2
HypA
Motif
Other DBs
NCBI-GeneID:
120484741
NCBI-ProteinID:
XP_039536092
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MAEAAAVPLHRFFCHCCKGEVSPKLPEYICPRCDSGFIEEVTEDSSLLDSSSNSLDDTAS
QFAELWQLLFVERPFSLDLESPDSERVPGGGSGSGSLGAGPFGGSVPGGLSGTLGGPLSV
AEHWGPGRPPRLHTQRRFRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVPGSPPLSWTGM
LHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSLPTVIITQEHTDCNMECPV
CKEDYTVGEPVRQLPCNHFFHSDCIVPWLELHDTCPVCRKSLNGDESGTQSSSEPSSLNT
DPRTPERWSF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggcggtccctctgcatcgcttcttctgtcactgttgtaaaggtgaa
gtgagccccaaactgccggagtatatctgtcccagatgtgactcgggattcatcgaggag
gttacagaggattccagtcttctggacagtagttcaaatagtcttgatgacacagcttca
cagtttgctgagctatggcagctgttgttcgtggagaggccgttcagtctggatctagaa
agtcctgactctgagcgggtccctggagggggtagtggctctgggagtctcggagccgga
ccgttcggcggttctgtcccaggtgggcttagtgggactctgggtggccctctaagtgta
gcagagcactggggtcccggtcgtcctcctcgcctgcacactcagaggaggttccgatcc
agaggaagcagtcgaccggatcgctctcccgctgtcgagggaatagtacagcagtttctc
gcaggcctttttgccaattcaggagtaccaggttctcctccgctgtcatggacgggcatg
ctgcactcaaatcccggggactacgcctggggacagggaggtctggatgcagtcatcaca
cagttactgggtcagttcgagaacactggtcctcctcctgctgagaaagagaaaatttcc
tccctccccactgttatcatcactcaggaacacactgactgcaatatggagtgccctgta
tgtaaggaagactatacggtcggtgagccggtccggcagctgccctgtaaccacttcttc
catagtgactgcatcgtgccctggcttgaactgcacgacacgtgtcctgtgtgcaggaag
agcctgaatggggatgaaagtggcactcagtcctcgtcagagccttcctccttaaacact
gatcctcgcacaccagagagatggtccttctga
DBGET
integrated database retrieval system
