Pimephales promelas (fathead minnow): 120484747
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Entry
120484747 CDS
T08155
Symbol
scrt1b
Name
(RefSeq) transcriptional repressor scratch 1b
KO
K09219
scratch
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120484747 (scrt1b)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
120484747 (scrt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-met
zf_UBZ
zf-BED
DUF7479
Rpr2
zf-C2HC_2
zf-C2H2_15
zf-C2H2_11
HypA
DUF7565
DUF7351
zf-C2H2_16
zf-C2HE
C1_4
Motif
Other DBs
NCBI-GeneID:
120484747
NCBI-ProteinID:
XP_039536099
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MPRSFLVKKVKLDDFSSTELESAYGRSRTDLSFRIHDKGYISDYITPAVYDGESDGGTKV
PSPGPIYDSNHSDYGAPDSDQPDSPQSEITSGYINGDNAVSEGYTVDAFFITDGRSRRKV
ISSSRTLQRHTCNECGKTYATSSNLSRHKQTHRSLDSKMAKKCPTCGKVYVSMPAMAMHL
LTHDLKHKCDICGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAF
KHYKCKRCNKTFALKSYLNKHYESACFKGAFSPLASVEA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggtcttttttggtgaaaaaggtgaagctagatgatttctcatccacggaactt
gagagcgcgtacggcaggtccaggaccgatcttagctttcggatacacgacaaaggctac
atcagtgactacatcaccccggccgtttatgatggagaaagtgacggtggcactaaagta
ccttccccgggacccatctatgacagcaaccacagtgactacggagcacctgactcggac
caaccggacagcccgcagtcagagatcacgtccgggtacatcaacggtgacaatgcggtg
agcgaaggttacaccgtggacgctttcttcatcacggatggcaggtcccgtcggaaggtg
atcagcagctcacggaccctccagaggcacacgtgcaacgaatgtggcaaaacctacgcg
acgtcttccaacctgagcaggcacaaacagacgcaccggagcctggacagcaagatggcc
aaaaagtgcccgacatgtgggaaagtgtacgtgtccatgccagccatggccatgcacctg
ctcacccatgacctcaagcacaagtgtgacatatgtgggaaagcgttcagcagaccttgg
ctactgcagggccacatgcgctctcacacgggcgagaagccctttggatgtgcacactgt
gggaaagcgttcgccgaccgctccaacctgcgggcgcacatgcagacccactccgcgttt
aagcattacaaatgcaagcgatgcaacaaaactttcgcactcaagtcctatctgaacaag
cactacgagtcggcgtgctttaaaggcgcgttctcgccgctcgcgtccgtcgaggcgtga
DBGET
integrated database retrieval system
