Pimephales promelas (fathead minnow): 120484811
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Entry
120484811 CDS
T08155
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pprm00535
]
120484811 (col14a1a)
Proteoglycans [BR:
pprm00535
]
Extracellular matrix (ECM) proteoglycans
Others
120484811 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
FN3_Tor_3rd
Fn3_Dep-1_2nd
VWA_3
Motif
Other DBs
NCBI-GeneID:
120484811
NCBI-ProteinID:
XP_039536177
LinkDB
All DBs
Position
Unknown
AA seq
1870 aa
AA seq
DB search
MQFSGSRIKLWCPLISLALIQIFTPVSAQVSAPRRLRFKVLSAVKLLVSWKEPKGEYDGY
KFIYTTEPGGETSELQIARGENKVIIKDFNPTKEYAVKVIAVSGNLHSRALQGKYSVDQS
SDGDTIQPQRLKEAGPVEEGNEISGEDQFVCTSPAVADIVILVDGSWSIGRINFRLVRMF
LENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNGFSTKDAVIDAVKNLPYKGGNTLTGLA
LSYILENSFKPESGARTDVPKIGILITDGKSQDDVIPPAQTLRSAGVELFAIGVKNADEN
ELKAIASEPEDTHVYNVADFSVMSTIVDGLTRKVCDGVEQQDKEINRDSVSEETVSPPQD
LIISEVTAHSFRVSWTHAPGSVERYRVVYHPTRADIVEEIVVGGRENSVVLQNLNSLTEY
EIAVFAVYRSAASDALRGNQITLALPTVSDLELYEVTDDSMRARWREAQGASGYMILYAP
LSSETTDERELKVDDTVIDVELKGLIPDTEYIVTVYAMFGEEAGDPTTVQETTMSLRPPR
NLRVTEVDHSSVRLNWDAVSSKVKGYRVIYIKTDGVQTNEVKLGPVTNVYLQNLSPLTEY
TVAVFALYDGGQSEALSGGFTTKLVPAPFSLMTSEVTSESFRVSWSHPARDVVLYKLAWS
PTGGGYEREMMLDASLDSYVIQDLSPFTEYMVSLSAIYKDETESIPVIVLENTLDWTTEV
PTTIPTTTAIVHLGVTDLWVDEETHFSMKVNWEVPDSDVEQYRVTYVSADRTEETVLVSG
NKSVILQPLLSDTRYKITVTPIYADEESSALSKSSSGKTLPLSGPSNLRVSDEWYNRFRI
SWDGPQFPTMGYRIIYQPISVSGPALETFVGDDVNTLLILNLLSDTEYSVQVIASYTTGS
SQPLTTKGKTLFLGVNNLSAKQVLSTSMCAQWQPHHHASVYRVVIESLLNGQKQEVRVGG
SASRECFFDLAPNTKYKISVYTISQDTEGPAVTTIATTAPAPTQPPTAPPTTIPSPTIPQ
AKEVCKAAKADLAFLVDGSWSIGDDNFQKIIRFLYSTTGALDVIGPEGTQVAIAQFSDDA
RTEFKLNSYSDKEALLDAVQRITYKGGNTKTGRAIKHVKEAIFTEDAGVRRGIPKVLVVL
TDGRSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKPSERHVFFVDDLDAFKKI
EEQLITFVCEAATATCPSMLMSGNTLAGFRMMEMFGLVEKHYSSVQGVSMEPGTFNSFPC
YRLHKDALVSQPTRYLHPEGLPSDYTISMLFRILPETPQEPFALWEILDKNNEPLVGIIL
DNGGKTLTLFNYDYKGEFQTVTFEGTEIKKIFYGSFHKLHVAISKTTVKVVIDCKTVGEK
SINAAGNITIDGVEVLGRMVRSRGRRENSAPFQLQMFDIVCSISWASRDKCCELPGLRVE
EDCPAMPHACTCAQDSKGPPGPSGPPGGSGIRGSRGDRGEPGLTETAGHSHFVSAARLVG
PQGPTGEIGPSGPQGPPGPQGPNGLSIQGAPGAPGEKGEKGEIGLPGPQGVPGASGGPGR
DGPPGQRGLPGKEGPQGRQGPPGPMGSPGAPGAPGSSGPPGQIGDQGQPGTPGTKGERGE
RGDIQSQAAVRAIARQVCEQLIQSHLSRYNSILNQIPSQSVSVRTVQGPPGEAGRPGSPG
PQGEQGPPGRPGFPGASGQNGRPGERGLPGERGEKGNPGIGTQGPRGPQGPPGPPGEGRT
GSQGPPGRPGIQGTSGRPGTPGSPGSAGPPGYCDQNSCLGYNVGVQQLPSSPYQNYGPAT
NYEDEEDDEDPYRGYRAYPPQYHPDPHAFRPGPAHPVDTVGMRSPGTRRFSRSTAEEGSI
GESEVQVKAK
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atgcagttttcgggatcgaggattaagctgtggtgtccgcttatctcgctggcactgatt
cagattttcacccctgtttcggctcaagtttcagccccacgaagacttcggtttaaagtt
ctgagtgcagtcaagctgcttgtctcatggaaggaaccaaaaggagaatatgacggctac
aaatttatatacactactgaaccaggtggggaaacaagcgagttgcaaattgcaagggga
gagaataaagtaataataaaggattttaatcccacaaaggagtatgcagtcaaggttata
gctgtgagtggaaacctgcacagccgagctcttcagggaaaatactctgtagaccagagc
agtgatggagacaccattcaacctcaaagactgaaagaagctggacctgtggaagagggc
aatgagatctcaggagaggatcagtttgtatgcacatctcctgccgtcgcagatattgtc
atcctggtcgatggatcttggagcatcggaagaatcaatttccgtctagttcgcatgttc
cttgaaaacctggtcaatgccttcgatgtaggaatagacaaaacccggattggactggcc
cagtacagcggagatccacgaattgagtggcacttgaatggcttcagcacaaaagatgca
gtaatagatgctgtcaaaaacctgccttacaagggaggcaacactctcaccggtcttgct
ctttcctacatcctggagaacagcttcaaacctgagtctggggctcgtaccgatgttccc
aaaattggaatcctgataaccgacggcaaatcccaggatgacgttatcccccctgctcag
accctgagaagtgctggagtcgagttatttgccattggtgtgaagaatgctgatgagaac
gagctgaaggccatcgcctctgaaccagaggacacacacgtttataatgtggctgacttc
agtgtcatgagcactatagtggatggtctgaccaggaaggtgtgtgatggagtggagcaa
caggacaaagaaattaatcgagattctgtctctgaagagactgtgtccccaccccaggac
ttgatcatttctgaggtgactgcacacagttttcgtgtgtcctggactcatgctcctgga
agtgtggaaagatatcgggtggtttaccatccaaccagagcagacattgtggaagagatt
gtggtgggcggcagggagaattcagtcgtcctgcagaatttgaactctctgactgaatac
gagattgcagtgtttgctgtgtaccgcagcgcagcgagtgacgctctcagaggcaaccag
atcacattggctctaccgacagtgagtgatctcgagctgtacgaagtgacagacgacagc
atgagagcccgctggagggaggcacaaggggcttctgggtacatgatcctttacgctcca
ctgagcagtgagactacagatgaaagagagctaaaggtggatgacacggtgattgatgtg
gaactgaagggattgattcctgacaccgagtacatcgttacggtctatgccatgttcgga
gaggaggccggtgatcccaccactgttcaggagaccaccatgtccctgagacctccacgt
aacctgcgggtcactgaagttgaccacagctctgtccgactcaactgggacgcagtatcc
agtaaagtaaagggctaccgtgtcatttatatcaagacagatggtgtgcagaccaatgag
gtgaagttgggtcccgtcaccaatgtgtacctgcagaacttgtcacccttaacagagtac
accgtcgctgtttttgctctctatgacggcggccaatccgaggcactcagtggtggattc
actacaaagcttgtgccagccccttttagcctgatgacatcagaggtcacctccgagagt
ttccgggtgagctggtcgcatcctgccagggacgtggtactctataagttggcctggtca
cctactggaggaggatatgagagagagatgatgctcgatgcctctttggactcatatgtg
attcaagacctgagtccttttacagagtatatggtttcactgtcagccatctataaagac
gaaacggagagcatccctgtgattgtgcttgagaatacattggactggaccacagaagtt
ccaaccaccattcccaccaccacagcaattgttcatctaggagtgactgacctatgggtg
gatgaggagacccactttagtatgaaagtgaactgggaggtgccggattcagatgtggag
cagtaccgagtgacatacgtcagtgcagaccgcacagaagagacagtgttagtctcagga
aacaaaagcgtgatcctgcaacctctcctctcagacacaaggtacaagatcacagtgacc
cctatttatgcagacgaagagtccagtgcgctatcaaagtcctcttccggcaaaacatta
ccactttctggtcccagtaacctcagggtgtctgatgaatggtacaatcgcttccgcatc
agctgggacggccctcagttccccaccatgggttacaggatcatctaccagcctatctct
gtgtcaggtccggctctagagacgtttgtaggggatgatgtgaacaccctgctgatcctc
aatctgttgagtgacacagagtacagcgttcaggtcatcgcctcatacaccaccggatcc
agccaacccctcaccaccaagggcaaaacactgttcctgggggtgaacaatctcagcgca
aaacaggtgctcagtaccagcatgtgtgcccaatggcaacctcaccaccatgcctctgtc
tacagagttgtcattgagtcactgcttaacggtcagaaacaggaagtgagggttggtggc
agtgcatccagagagtgcttctttgaccttgcccccaacaccaagtacaaaatcagcgtc
tacaccatttcacaggacacagagggccctgccgtcaccaccattgcaaccactgctcca
gcacccacccagccaccaaccgcaccacccaccactatcccttctcctaccatcccccaa
gccaaagaagtttgcaaagcagccaaggcagacctagccttcctcgtagacggctcctgg
agtattggagatgacaactttcagaagattatccgtttcctatacagcacaactggtgca
cttgatgtgattggtccagagggaacacaggtggccatcgctcagttcagtgatgatgcc
agaactgagttcaagctcaactcctatagcgacaaggaagctctgctggatgctgtgcag
cgcatcacatacaagggaggaaacaccaagacaggtcgagccattaagcatgtaaaggag
gccatctttactgaggacgcgggcgtaaggaggggcattcctaaagtgctggtggtgctc
acggacgggcgctctcaggatgacgtcaataaggtctctaaggagatgcagatggagggt
tacatcatctttgccattggcttcgctgatgctgactacggggagctggtgaacatcgcc
agcaagcctagcgaaagacatgtgttctttgtggacgatctggatgccttcaagaagatt
gaagaacagctcataacttttgtttgtgaggctgcaactgccacttgtccctcgatgtta
atgagtgggaacactttagctggtttccgtatgatggagatgtttggtttggttgagaag
cactacagcagtgtgcaaggtgtctcaatggagcctgggactttcaacagcttcccctgc
taccgattgcacaaggacgccctcgtctcccagcctaccaggtatctacatcctgaaggc
cttccctccgactacactatatctatgctctttcgcatactgcccgaaactcctcaggag
ccttttgcattgtgggaaatcctcgacaaaaacaatgagccactggtgggcattattctg
gacaacggagggaaaacgttaaccttattcaattacgactacaagggtgaatttcaaacg
gtgactttcgaaggaactgaaattaagaagattttctatggcagtttccataagcttcat
gtggccatcagcaaaaccactgttaaagtggtgatcgactgcaaaacggttggagagaaa
tccatcaatgccgcaggtaacatcaccattgatggagtggaggttctgggacgcatggtc
cgctcacgtggaaggagagaaaactcggcaccgtttcagctccagatgtttgacatagtc
tgcagtatatcatgggccagtcgggataagtgttgtgagctcccaggcttgagagtagaa
gaggactgtcctgccatgccccatgcctgcacttgtgctcaggacagcaaaggacctcct
ggaccctcagggccaccgggcggttctggtatcagaggttcaagaggagatcggggggag
ccaggcttgacggagactgcagggcattcacactttgtttcagcagcccggctggtgggg
cctcaagggccaaccggtgagattggaccttcaggaccgcaggggccaccgggtcctcag
gggccaaatggactgtccattcagggggcaccgggggctccaggagagaaaggagaaaag
ggtgaaataggtctgccaggtcctcagggtgtaccgggtgccagtggaggaccaggccga
gatggacccccaggacaaagaggtctaccgggtaaagagggaccccagggacgacagggc
cctccaggaccaatgggtagccctggtgctcctggggctccaggatcaagtggaccacca
ggacaaattggtgatcaggggcaacctggaactcctggcaccaaaggcgagcgaggagag
agaggtgacatacagtctcaggccgcagtccgtgccatagcgcgacaagtttgtgaacag
ctaattcagagtcacttgtctcgctacaactctatcctgaaccagattcccagtcagtct
gtttcagtacggacagtacaaggtccaccgggtgaggctggtcggccggggtctccgggg
ccacagggagaacagggtcctcctggcagaccaggattccctggagccagtgggcaaaat
ggccgcccaggagagagaggtctcccgggagaaaggggagagaagggcaatccagggatt
gggacacaaggccctcgtggtcctcaaggacccccagggcctcctggagaaggtcgaacg
ggaagtcaaggcccaccagggagacctgggattcaaggcacctcaggacgtccaggtacc
cctggtagccctggttctgctggacctcccggatactgcgatcagaactcctgcctcggg
tacaacgttggagtacaacagttaccctccagcccctaccaaaactacggccccgccacc
aactatgaggacgaggaggatgacgaggacccttaccgtggctaccgtgcttaccctcct
cagtaccaccctgacccccatgccttcaggcctggccccgcccaccctgttgacacggtg
ggcatgaggtcacctggcacacgtcgcttttcccgcagcacggccgaagaggggagcatc
ggtgagtcggaagtacaagtgaaggccaagtag
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integrated database retrieval system
