Pimephales promelas (fathead minnow): 120484888
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Entry
120484888 CDS
T08155
Name
(RefSeq) BRCA1-A complex subunit RAP80-like
KO
K20775
BRCA1-A complex subunit RAP80
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120484888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120484888
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
120484888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
120484888
NCBI-ProteinID:
XP_039536259
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MPRRKRTLDESGRRAKVSRVEHNEETLVISDSDQEEEDDSSLKRSSRTSRRRRRENESQL
QEMTEEEMLLLAMRLSAQEANSAAQRQRQLEDSDIQKAIEESLHESAVNDSQGQDEAASS
SGQPQQDVANTVLHLRRKLSYPRPDPTHSETERENTSPLLEMPDLSQTTSSRSSTQLSKT
PATSQDKTSDKLTVISDTPEDELFKSRSESQMSPVFPLHRSLIRHSVVCVEKLSQELIPG
SAGPMNFHPEDTCADRFLSPQKDSPVSKRPVSTQDRFKPTSHLPEDKDGHRDANGEEDDT
QIPDEDTPLATQLSQGLSTDPDTCLSPSRRSQISSPKCVPENSNEDITETSNNPDQKQVE
DQTTQGENVKSDTEKAPNQSWNEFTSHMVLHLADEDDDEEEEVVFPSPVKKISIRTGLSP
NQSCVSSATITLDSSTQGTQMSRSVLEEDSRASKGAESQPSDRKPTHTSVGKKGPCTISY
YWGVPFCPMGQSPDEYTRVIMCQMEVYEKSLKEAQRKLLRKADWGQPVLPGSSERPFAGR
RWKRNRAPQLSEDEEDNEEEKNRKAVEEEREEERQGSVAGSQEEAEGGQTETYVVVSSPE
TKDEQEN
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccggaagcgcacgctggatgaaagcggaagaagagctaaagtcagcagagtg
gagcacaatgaggagaccctggttatatctgattctgatcaagaggaggaggacgatagt
tcccttaaacggtcctctcggacatcccggaggagacgaagagagaacgagtcccaacta
caagagatgacggaagaagagatgttgctcttggccatgagactgagcgctcaggaagcc
aacagtgcagcacagagacagagacagctggaagacagcgacatacagaaagccatagaa
gaaagtcttcatgagagcgctgtaaacgactcgcagggtcaggatgaagccgccagctct
tcagggcaaccgcagcaggatgtagcaaacacagtattgcacttgagacgaaagctgtct
taccccagaccagatccgacacacagcgagactgagagggaaaacactagtccgctgcta
gaaatgcctgatctgtcacagacgacctcctcgaggagttcaacgcagctctccaagact
cctgcgacctctcaggacaaaacctcagataaactgacagtcatcagcgacactccggag
gatgagctcttcaagtctcgctcagagtcccagatgtcccctgtcttccccctgcatcgc
agcttgattcgccattctgtagtatgtgtggagaaactgagtcaggaactcatcccgggg
agcgcaggcccaatgaactttcaccccgaggacacctgcgccgacaggtttctgtcccca
cagaaggactcgcctgtttccaaacggcctgtctccactcaggatcgcttcaaaccaaca
agccatctgccagaggacaaagatggccatcgagatgccaacggggaggaagacgatact
caaatacctgatgaagatactcctttagcaacacagctaagccaaggtttgagcacagat
ccagatacgtgcctttcaccttctagaagatcccagatatcaagccccaaatgtgtgcct
gaaaacagcaatgaagacatcactgaaacgagtaacaatcctgaccaaaagcaagtggag
gatcaaaccactcagggtgagaatgtaaaatctgacactgaaaaagctccaaaccagtct
tggaatgaatttaccagtcacatggtcttgcatttagcagatgaggatgatgatgaagaa
gaagaggttgtctttccaagcccagtcaagaagatttcaatcaggactgggctttcccca
aaccagtcctgtgtatcttcagcgaccatcaccctcgattcttccacacaaggcacgcaa
atgtcccggtctgtcctggaggaggactcgagggcgtccaaaggtgctgagtcccaaccc
tctgaccgtaaaccgacacatacttcagtgggaaaaaaaggaccatgcacaatctcatac
tactggggagtgcctttctgtcccatggggcaaagcccggacgagtacacgcgtgtgatc
atgtgtcagatggaggtgtacgagaagagcctgaaggaggcccagcggaagctgctgcgc
aaagcagattgggggcagcccgtgttgcccggctcctcagagaggccgttcgctgggagg
agatggaagcgcaacagggctcctcagctgtcggaggatgaggaggacaatgaagaagaa
aagaacagaaaagcagtagaagaagagagggaggaagagaggcaggggtctgtggcgggg
tcacaggaggaggctgagggaggacagactgaaacatacgtagttgtgtcttctccagag
actaaagatgagcaggagaactag
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integrated database retrieval system