Pimephales promelas (fathead minnow): 120484924
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Entry
120484924 CDS
T08155
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23-like isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120484924
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pprm04031
]
120484924
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120484924
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120484924
GTP-binding proteins [BR:
pprm04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
120484924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-RING_5
Gtr1_RagA
zf-B_box
zf-RING_2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
120484924
NCBI-ProteinID:
XP_039536302
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MAAAVGINKQASMEPCARHGRGNTSNAVKVLECGVCEDVFSLQGDKVPRLLLCGHTVCHD
CLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGASHQSGMSEDSLR
EMGECVIRCDEDETHTASMYCTVCATHLCAECCQLTHSTRTLAKHRRVPLADKPHEKMLC
PQHQVHAIEFVCLEDGCLPGPLMCCVCKEYGKHQGHKHAVLEGEANQIRGSILDMAHCIR
TFTEEVSEYSRKLVGIVQQIEGGEQIVEDSMGMAHTEHVPGTAESARSCVRAYFADLHET
LCRQEEMALSVVDAHVRERLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVVLSKQ
EINRLLETLQKQQQQFTELADHIQLDAGIPVTFTKDNRVHIGPKMEIRVVTLGLDGAGKT
TILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFV
IDSCHRDRLMESHSELAKLLTEKELRDALLLIFANKQDVPGAVSVEEMTELLSLHKLCCG
RSWHIQGCDARSGMGLHEGLDWLSRQLVAAGVLDVA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgctgtcggtataaataaacaggcgtcgatggagccgtgtgcgcgacacggc
cgtggaaacacttcaaatgcggtgaaggtgttggagtgtggtgtgtgcgaggatgtgttt
tctctacagggggacaaggtcccgcggctgctgctgtgcggacacacggtgtgtcacgac
tgcttgacccgtctgcctctccatggcagggcagtccgctgcccctttgacagacaggtc
accgagctgggagactcgggtgtgtggggcctaaagaagaactttgccctgctagaattg
cttgaacggctacagaatggggcatcccatcagtcaggcatgtcagaggattcacttcgg
gagatgggcgagtgcgtaatccgctgtgatgaggatgagactcacactgcttccatgtac
tgcacggtgtgtgccacgcacctgtgtgctgagtgctgccagctcacacactccactcgg
acgctggccaagcaccggcgcgtgcccctggcagacaagccccatgagaagatgctctgc
ccgcagcaccaggtgcacgccatcgagtttgtgtgcctggaagacggctgcctgcccggg
ccgctcatgtgctgcgtgtgcaaggagtacggaaagcaccaagggcataagcatgctgta
ctagagggtgaagccaaccagattcgtgggtccatcctggacatggcacactgcatccgt
acgttcacagaggaagtgtcggagtactccaggaaactagtgggcatcgtgcagcagatt
gaaggaggagagcagatcgtggaggacagcatgggcatggctcacactgaacatgttcca
ggaacagcggagagcgcccggtcttgcgtacgtgcctactttgccgatctacacgagacc
ctgtgtcgtcaagaggagatggctctgagtgtggtggacgcgcacgtgcgagagaggctg
atctggcttcgacagcagcaggaggacatgaccatactgctgtcacaggtgtccactgcc
tgtctgcactgcgagaaaacactacagcaggatgattgcagggtggttttgtcgaaacag
gagatcaaccgactgctagagacactgcagaagcagcagcagcagtttacagagctggcc
gaccacattcagctggatgcaggcatccctgttactttcactaaggacaaccgtgtgcac
attggtccaaagatggagatccgggttgtgactttgggcttagatggagctggcaaaact
actattcttttcaaactgaagcaagatgagtttatgcagcccataccgaccataggtttt
aatgttgaaactgttgaatacaaaaacctgaaattcaccatttgggatgtgggtggcaag
cataaactccgcccactctggaaacactattatctgaacacacaagcggtggtgtttgtg
attgacagctgtcaccgagaccggctgatggagtctcacagtgaactggccaaactgctg
acagagaaagagctcagagatgctctgctgctcatctttgccaacaaacaggacgtcccc
ggcgcggtgtccgtggaggagatgactgagctcctgagcttacacaaattgtgctgcggg
cgcagctggcacatccagggctgtgacgcccgcagtggcatggggcttcacgagggcctg
gactggctctcacgccagctggtggccgcaggagttttggatgtggcctga
DBGET
integrated database retrieval system
