Pimephales promelas (fathead minnow): 120484952
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Entry
120484952 CDS
T08155
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120484952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprm03009
]
120484952
Ribosome biogenesis [BR:
pprm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120484952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WDR55
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_HPS5
DUF7165
Beta-prop_IFT122_1st
KNTC1_N
Beta-prop_VPS8
Beta-prop_IFT140_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_SPT8
PROPPIN
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
120484952
NCBI-ProteinID:
XP_039536346
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MSVMMDSPAPVVSEPRTRGKKTRGKRPLSDASASEERGKQQRHAELCATLGGEDASVRHL
EELVFGAEERLADTLAQDSRAPLEDDEVCSVSSEDSEVRQHHRRRAVWEDEEDELEEEID
MTHRFRRDLKKSEAETKMTKQKLQQRLKDQFQKAMGGAPGWAEQERPRRTRGAEREEEEA
EDLLRRTGNFIGSSDTLPKGTIKIKKCLDANSESPAESKLTSVQFHPSAQILMTSSLDHS
ISLFQVDGKTNAKIQTIHLEKFPVNKAAFSADGEQIVATGWRNKLFYIYDMMEGRVIPVS
NVRGLNEQKVSDFQVSPDGKFLLLFGSSGFLHLMSSKTREVVRSMKLNGTVCATAFTADG
SQIFANSEEGEVFIWDVQSSKCVKRFEDDGCVRGTSLALSRDGSYLACGSQAGVVNIYSQ
RDCLLEHEPKPLKAVLNLLTPATSLRFNSSAEILAIGSRHADEANRLVHLPSFTVFSNFP
KFQKKMIFQTQSVDFSPRSGFYSVANNKGHALLFRLLHYHDF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcatgatggattcgccagcgcctgtcgttagtgagccgaggacgcgcgggaag
aagacgcgggggaagaggccgctgagcgatgccagcgcgtcggaggagcgcggtaaacag
cagaggcacgcggagctgtgcgcaacgctcggcggggaggacgcgtccgtcaggcacctg
gaggagctcgtgtttggtgcggaggagcggctcgcggacacactcgcgcaggacagcagg
gctccactggaggatgacgaggtctgtagtgtttcctccgaggacagcgaggtgcgtcag
caccacagaagaagagcagtgtgggaggatgaggaggatgagctggaggaagagattgac
atgacgcatcggttccgcagagacttgaagaagagcgaagccgagacaaagatgacgaag
cagaagctgcagcagagactgaaggatcagttccagaaggcgatgggtggtgccccaggc
tgggcggaacaggaacgcccccgccggacaagaggagctgagcgtgaggaggaggaggca
gaggatctgctgcggcgcactgggaacttcatcggctcctccgacacgcttcctaaagga
accattaagataaagaagtgtttggatgcgaacagtgagagtccggccgagtcgaagctg
acctcagtccagttccacccgtcagctcagatcctgatgaccagctctctggaccactcc
atatctctgttccaggtggatggcaagaccaacgccaagatccagacgatccacctggag
aagttcccggtgaacaaggcggcgttcagcgctgacggcgagcagatcgtggcgaccggc
tggaggaacaagctcttctacatctacgacatgatggagggcagagtcatccccgtctcc
aacgtacgaggtctgaatgagcagaaggtgtcagacttccaggtttctcccgatgggaag
tttcttcttctgttcggatcctctgggtttctgcatctcatgagctcaaagaccagggaa
gtggtgcgcagcatgaagctgaacgggacggtgtgtgccaccgccttcactgcagacggc
agccagatcttcgccaactccgaggaaggcgaggtgttcatctgggacgtccagagcagt
aagtgtgtgaagaggtttgaagacgacggttgtgtgagaggaacatcactagcactctct
cgagacggctcgtatctggcctgtggctctcaggccggcgtggtgaacatctactctcag
cgggactgtctgctggagcacgagccgaagccgctgaaggccgtcctaaacctgctgacg
ccggcgacgtctctgagattcaacagcagcgccgagatcctggccatcggctcgcggcac
gcggatgaggccaaccgactggtgcacctccccagtttcacggtgttctccaacttccca
aaattccagaagaagatgatctttcagacccagagtgtggacttctccccgaggagtggc
ttctactccgtggccaacaataaaggccacgcgctgctcttcaggcttctacattatcat
gacttctga
DBGET
integrated database retrieval system
