Pimephales promelas (fathead minnow): 120485159
Help
Entry
120485159 CDS
T08155
Symbol
ubp1
Name
(RefSeq) upstream-binding protein 1 isoform X1
KO
K09275
transcription factor CP2 and related proteins
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120485159 (ubp1)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Grainyhead
120485159 (ubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CP2
SAM_3
SAM_1
Motif
Other DBs
NCBI-GeneID:
120485159
NCBI-ProteinID:
XP_039536660
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MAWVLKMDDATIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDVSVPVESDT
KNPPFQYVLCAATSPAVKLHEETLTYLNQGQSYEIRMLDNRKIGEMPELNKTVKSLVRVV
FHDRRLQYMEHQQLEGWKWNRPGDRLLDIDIPMSVGITEPNTHTSQLNAAEFLWDLSKRT
SVFVQVHCISTEFTPRKHGGEKGVPFRIQIDTFKQNESGEYTEHLHSASCQIKVFKPKGA
DRKQKTDREKMEKRTPQEKEKYQPSYDTTILSETRLEPVIEEAVEHELKKSSKRTLPADC
GDSIAKSKRGSCSPWPDNAYVNPITAATPTFTSSTNSYSTTSSTVPDSESSSPNHQGDAG
SPVSVESLTILQSLSPTSSIQDAQKWLLKNRFNSYTRIFTHFSGSDLLKLTRDDLVQICG
AADGIRLYNALKARAVRPRLTVYVSLESSLSESPLLEKRGRSKNGEHSSPTSIPVYHALY
LEEMTACELTKKISSVLSLPMVHINQVYKQGPTGIHILLSDQVVYNFLDESSFIVSTIQD
DTSDGFHLVLK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggtgctgaagatggacgatgcgaccatcgagtcggggcttgtgcacgacttc
gatgccagtttgtctggtatcggccaggagctcggagctggcgcgtacagcatgagtgat
gtgttggctctgcccatctttaagcaggaagatgttagcgttcctgtggagtctgacacc
aagaatcctccgtttcagtatgtgctgtgtgccgccacttctcctgctgtgaagcttcac
gaggagacgctcacctacctgaaccaaggccagtcttatgagatccgaatgcttgataac
aggaaaataggggagatgcctgaactcaacaagactgtgaagagtttagttagggtggtt
ttccatgaccgaaggcttcagtacatggagcatcaacagctggagggctggaaatggaat
cggcctggcgaccgcctccttgacatcgatatccccatgtcagttggcatcaccgagccc
aacacacacacgtcacagctaaacgcagcagagttcctgtgggatctttccaaacgcacc
tctgtatttgtgcaggtccattgcatcagtacagagttcaccccacggaaacacggcgga
gagaaaggagttccgttccggatccagatcgacaccttcaaacaaaatgaaagcggagaa
tacactgagcacctgcactctgccagctgccagatcaaagtctttaagccaaagggagcg
gacagaaaacaaaaaacggacagagagaagatggagaaaaggactccgcaggagaaagag
aaatatcaaccctcttatgataccactattctgtcagagactcgattggagccggtgatt
gaggaggctgtggaacatgagctaaagaaatctagcaagcggacacttcctgcagactgt
ggagattccatcgccaaaagcaagagaggaagttgttcaccatggccagataatgcgtac
gtcaaccccatcacagcagctacaccgaccttcacctccagcacaaactcctacagcact
actagcagcacagtacctgacagtgagtcatcttcacctaaccaccaaggggatgctggt
agccccgtgtctgtggagtctttgacaattctgcagtccctgagtcctacatcctctata
caagatgcacagaagtggctccttaagaacagattcaactcgtacactcgcattttcacc
catttctcaggttctgatctactgaaattaactcgtgacgatttagtccaaatttgtggt
gcggccgatggaatcagactctacaatgcacttaaagcacgagcagtgcgtcctagactc
acggtgtacgtgtctctggagtcgtctctgagcgagagccctctgctggagaaacgtggc
cgcagcaaaaacggcgaacatagcagtcccacatcgatacctgtttaccatgcgctttac
cttgaggagatgaccgcttgtgaactcactaagaagatctccagtgtcttgtcgcttccg
atggtccacatcaaccaagtctacaaacaggggcccacagggatacacattctactcagt
gaccaggtggtttataacttccttgatgagagcagtttcattgtcagcacaatacaagat
gacaccagtgatgggtttcacctcgttctgaagtag
DBGET
integrated database retrieval system
