Pimephales promelas (fathead minnow): 120485197
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Entry
120485197 CDS
T08155
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04514
Cell adhesion molecule (CAM) interaction
pprm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120485197 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120485197 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pprm00535
]
120485197 (sdc3)
Proteoglycans [BR:
pprm00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
120485197 (sdc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
SDH8
Motif
Other DBs
NCBI-GeneID:
120485197
NCBI-ProteinID:
XP_039536737
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MKRPCWMALALLLLAQTALAQRGTSRLSDEETSGDGDELYDDEDFSSGSGSGFPDIDVRP
SEASVAFTTKEPLPLSTTQATGPAPSAPPAAEPSGSPAPELERESGLGQDVDTDSKPEIE
NEKKWEIEEEDRDQESVTEIRLDQERPKATVAPRLTDVPEVFVDSSITLGETTVAPSDLE
EEDDLYITTETMMFETSSTPETTTDDITTTEVMPTTVSSTTAKPTRARPAPTTPSSAPVR
PRQPQTTPSPAPVRPRQPQTTPSRAAPTESSTRSLMSSSTQTQTTDETVNNEVAGQGPSG
DFEIRETEVRQGNELGQGRGAGEPDLTGNTVDAAGSSAAQLPQKNILERKEVLIAVIVGG
VVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcccgtgctggatggcgctcgcgctgctgctgctggcgcaaaccgcactggcc
cagcgtggcacatctcgactgagcgacgaggagacttctggagatggagatgagttatat
gatgatgaagacttctcctctggatccggctctggctttccagatatagatgttcgtccg
agtgaagcaagtgtggctttcactacaaaggagcccctcccactttccaccacacaggcc
acaggccccgccccctcggctcccccggccgccgagcccagtggctcacctgcacctgag
ctggagcgagagagcggcctgggacaagatgtagacacagacagcaaaccggagatagaa
aacgagaaaaagtgggagattgaggaggaggatagagatcaggaatccgtgacagaaata
aggttggaccaagagaggccgaaggcaacggttgcaccgcggttgactgatgttcctgaa
gtgttcgtggactcatccatcactctgggtgagactacagtggcccctagtgacctggag
gaagaggacgatctgtacattactacagaaactatgatgtttgagacatccagcacacca
gagaccaccactgatgacatcacaaccactgaggtcatgcccaccaccgtttcgtccacc
actgctaaaccgaccagagcccgacctgccccgaccacaccaagctccgcccccgtacga
ccccggcaaccacagaccacgccaagtcctgcccccgtacgaccccggcaaccacagacc
accccgagtagagccgccccgactgagagcagtactcgctcgctcatgagctccagcaca
cagacacaaacaacagatgaaactgtaaataatgaagttgcaggacaaggtccaagtggt
gactttgagatccgcgagactgaagttaggcaaggcaacgagctcggtcaaggaagagga
gcaggagaaccggatctgaccgggaacacagtagacgctgccggaagctcggctgctcaa
cttccacagaagaacatcctcgagaggaaggaggtcttgatagcggtgatcgtcggaggt
gtagtcggagctctcttcgctgcgttcctcgtaatgttactcgtctaccggatgaaaaag
aaagatgaaggcagctacacattggaggagcctaaacaagccaccgtcacctaccagaaa
ccggacaagcaggaagaattctacgcctaa
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