Pimephales promelas (fathead minnow): 120485199
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Entry
120485199 CDS
T08155
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120485199 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120485199 (pex1)
Membrane trafficking [BR:
pprm04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
120485199 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
nSTAND3
ABC_tran
TIP49
AAA_18
AAA_28
AAA_33
Sigma54_activ_2
RNA_helicase
DUF815
AAA_5
NPHP3_N
AAA_25
RuvB_N
NACHT
AAA_29
AAA_2
FtsK_SpoIIIE
nSTAND1
IstB_IS21
DUF4633
APS_kinase
Motif
Other DBs
NCBI-GeneID:
120485199
NCBI-ProteinID:
XP_039536741
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MLGSQGIQPVTLVFNNSKNCFLQLPSNFATHLCLHENQILELSWGVSAPVFLSWIRSSGP
EDRVEISRQLGEKLGLKEGEQGYLRPCHQVQSVQQVFVEPLSPDDWEILELHSNVLEQQL
LDQIRVVFRDGVFPVWVDQYTVIYIRIASLSPSVPYGRLEQFTELVVSPKLHPGNDQLHQ
TRSVEPSQHLQHQIVDVTSSSSSFVHREPLSGHLESQNEGIGITDLKSLFRYLFTRGFEP
AKENLTVPTIPTILNDCILRTCGTPPSSVSHLGSSHGDVHILPWNLQEQENWNPGQSALT
YGRLSKILSPKELRENVKQAMEKKKIRDGPQKGKDAEECKENAVVVRMLCHNVKRLQEDQ
KFHKCEEIYSGKVWIPRVLQRHLKIEPHSAVRIQPLKSLPRVAEAVMVRPLLPLAESEKE
EDIQSAFLNWLHAQSHQPLTCLTGRTNVILLPCAEGKEEFVLTVLKPEQQQDDEMFFLSS
SLLKKTDVQIVREPQYSDHSGAGDDNEDLGFPSLSSLGGVEDISRSAFEHISHALMGGSL
SRELVSTGRGLRSGALLITGAKGSGKSSLSRALCRKASEELDVHIQVVDCKTLKGKRADK
IRQRLEEVFEQAVWRQPSAVLLDDLDHVTGAATSPEHEHGPEAVLRQHIAQSLRDLVDEM
VVRSSLIALMVTAQSEHSLHQTLTAVQGSHFFQSFCKIQTPDQAQRVEILRSLIVKKNFL
DCPITLDLDSVAKETEGFMPQDLNLLLKRAIHANTLHSRNNGVSEDLSYKDFRQALQGFT
PPSLWGAQLQAPTGAGMECIGGLHQARQLLMDIILLPAKYPLLFSSLPMRQCSGVLLFGA
PGTGKTLLAGAVAKESGMNFISIKGPELLSKYIGASEQAVRDVFQRAQQAKPCILFFDEF
DSLAPRRGHDNTGVTDRVVNQLLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKS
LYCPPPDREARLEILRALTHSVPLAADVDLEQIAVATELFTGADLKALLYNAQLEAIHSS
LGPNLLHDLGSGSDSDFSLSSLIFLNHSSGSDDSAGEGDAALEHSMVLLDPSELPPEDPR
HNIWRLYFGSSFESEMDNQSLSELNSQYQSGANSTAPDLTGASMRDPSSCHAPLFMSCLQ
DGFQELTHEHSERLRAEVSTVKNSYRKNTDESSLVQTGPSKPGALICQTHLTTALANTRA
SVSREDWRRFTELYESFGASKEGKSQRTASLKAGQRVTLA
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgttgggaagccaagggattcaacccgtcactctggtcttcaataactcaaaaaactgc
tttcttcagctgccatcgaacttcgccactcatctctgtcttcatgagaaccagatcctg
gagctgtcatggggtgtttctgcacccgtgttcctcagctggatcaggtcttcaggtcca
gaggaccgagttgagatcagcagacagctgggagagaaacttgggctcaaggagggagaa
caggggtatctgcggccatgtcatcaggtgcagtcagtgcagcaggtgttcgtagagcct
ctgtctccagatgactgggagatcctggagctgcacagcaatgttctggagcagcaactt
ctagatcagatccgagtggtcttcagggatggtgtgttccctgtatgggtggaccagtac
accgtcatctatatcaggatagcgtccctatctccatctgttccttatggccgactggag
cagttcactgagctcgttgtctctccaaaactacatccaggaaatgatcaactccaccaa
actcgatcagtggagccaagtcaacatctacaacaccagatcgttgatgtcacgtcttcc
tccagctcattcgtccatcgggaacccctcagtggtcaccttgagagtcagaatgaaggc
ataggtataactgatctgaaaagcttgtttagatacttgtttacacgaggatttgagcct
gcaaaggagaatctcacagttcccacaattcccaccatcctgaatgactgtatcctcaga
acatgtggaactcctcctagctctgtcagccatttaggctcttctcatggagatgtccat
atactgccatggaacctgcaagaacaagagaactggaatccagggcagtctgccttaaca
tatggtagactttcaaagatcctttctcctaaagaactcagggagaacgtcaaacaggcc
atggagaagaagaaaatcagagatggacctcaaaaagggaaagacgcagaggaatgtaag
gagaacgctgttgtggtcaggatgctttgtcataatgtgaaaaggctgcaggaagaccag
aaattccataaatgtgaagaaatttactctgggaaggtttggatcccaagggtgctgcaa
aggcatttgaagattgaacctcactcggcggtgaggattcagcctttaaaatcattgcca
agagtagcagaagcagtcatggttcgcccattactaccgttggcagaaagtgaaaaagaa
gaagatattcagtctgcattcctcaactggctgcatgctcagagccatcaacctttgacc
tgtctgaccggacgcactaatgtcattctcctaccttgtgctgaaggaaaagaagagttt
gtcttgactgtgctaaaacctgagcaacagcaagatgatgagatgttctttctatcatcc
agtttacttaagaaaacagacgtgcagattgtcagagagccacaatattctgaccacagt
ggtgctggtgatgataatgaagaccttggctttccctccctcagctctcttggtggggta
gaggacatcagcaggtctgctttcgagcacatctctcatgctctaatgggaggttctctg
tcgcgtgagctggtctccacgggacgtggactgaggagtggagctctactcatcacaggt
gcaaagggcagtggaaaatcttctctatctagagcgctgtgtcgaaaggccagtgaagag
ctggacgtccacattcaagttgtggactgcaaaacactaaaaggtaagagagcagacaaa
atcagacagaggttggaagaggttttcgagcaggcagtttggagacaaccttcagcggtc
ctgctggatgacttggatcacgtgaccggtgctgcgacctcacctgagcacgagcatggg
ccagaggccgtactgcggcagcacattgcacagagtctgagggatttggtggatgagatg
gtggtgcgctccagtctcatagctctgatggtcacggcacagagtgaacattcccttcat
cagactctgactgcggtgcagggttcacacttcttccaaagcttctgcaagatccaaaca
ccagatcaggctcaaagggttgagattctgaggtctttgatagtgaaaaagaacttcctc
gattgtccaattactcttgacctggacagtgttgccaaggaaactgagggcttcatgcca
caagacctgaacctgctgctcaagagggccatccatgccaacactttacacagcagaaac
aatggcgtctctgaagatttgagctataaggacttcagacaggcccttcagggcttcacc
ccgccctccctctggggggctcagctgcaggcccccaccggggccggcatggagtgtatt
ggcggacttcatcaggcacggcagctcctgatggacatcatactgctgccagctaagtac
ccgctgctcttctccagtcttcccatgcgtcagtgctctggtgtgctgctttttggcgct
cctggtacaggcaagactttactagctggagctgtggccaaagagagcggcatgaacttc
atcagcatcaagggtcccgaactcctcagcaagtatattggtgccagtgagcaggcagtt
agagatgtgtttcagagggctcaacaagctaagccgtgcatactgttctttgatgagttt
gactctctggcccctcgaagaggccatgacaacacaggggtcactgaccgtgtggttaat
cagctacttactcagctggatggagtggaaggactgacaggggtgtatgtgttggctgcc
accagtcgtcctgacctgattgatcctgctctcttgagacctgggcgactggacaagtct
ctctattgccctcctcctgatcgggaggcacgactggagatcctgagggctttaactcat
tctgtgccgctggctgcagatgtggacttggagcagattgctgtggcaacagagctgttc
actggagccgacctaaaggcccttctctataacgctcagctagaggccatccatagcagc
ctggggcccaaccttctgcatgatctgggctcagggtcagacagtgatttcagcctctcg
tccctgatcttcctgaaccacagcagcgggtcagatgactcagctggagagggggacgca
gcgctggagcactctatggttctgctggaccccagtgaactccctcctgaggacccacgt
cacaacatctggcgcctttactttggcagctcctttgagtctgaaatggataaccagtct
ctttctgaattgaattctcagtaccagtctggagccaattcgactgcccccgacctgaca
ggggcgtcaatgagggatccaagctcctgtcacgcccccctttttatgtcctgtctgcaa
gatggctttcaggaactgacccatgagcattcagaacgcctccgagcagaagtcagcacc
gttaagaacagttaccgcaaaaacacggatgaatcctctctggtgcagactggccccagt
aagcctggcgctctcatatgccaaactcacctgaccaccgctttggctaacactagagca
tctgtcagcagagaagactggaggagattcactgaactatatgagtctttcggagcctct
aaggaaggcaagtctcagagaactgcttcattaaaagcaggtcagcgggtgaccttggct
taa
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