Pimephales promelas (fathead minnow): 120485212
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Entry
120485212 CDS
T08155
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120485212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120485212
03016 Transfer RNA biogenesis [BR:
pprm03016
]
120485212
03012 Translation factors [BR:
pprm03012
]
120485212
04131 Membrane trafficking [BR:
pprm04131
]
120485212
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120485212
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120485212
Transfer RNA biogenesis [BR:
pprm03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120485212
Translation factors [BR:
pprm03012
]
Eukaryotic type
Elongation factors
120485212
Membrane trafficking [BR:
pprm04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
120485212
Exosome [BR:
pprm04147
]
Exosomal proteins
Proteins found in most exosomes
120485212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Gtr1_RagA
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
120485212
NCBI-ProteinID:
XP_039536768
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPPYSQKRYEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEASSNMSWFKGWKIERKEGAANGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMVVTFAPANVTTEVKSVEMHHESLV
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGSFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIILMIPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKAVDKKASSAGKVTKSAQKAAKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagattcatattaacatcgtggttatcggccacgtcgattctggcaag
tccaccaccaccggacatctcatatacaaatgtggaggtatcgataagagaaccatcgag
aagtttgagaaggaagctgctgagatgggcaagggctccttcaaatatgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcacaattgatatttctctctggaagttc
gagaccagcaagtactatgtcaccatcattgatgcccctggacacagagacttcatcaag
aacatgatcactggtacttctcaggctgactgtgccgtgctgattgttgctgctggtgtt
ggtgagtttgaggctggtatctccaagaacggacagacccgtgaacatgccctgcttgcc
tacactctgggagtgaaacagcttattgttggaatcaacaagatggactccaccgagccc
ccctacagccagaagcgttatgaggaaatcaccaaggaagtcagcgcctacatcaagaag
atcggctacaaccccgccaccgtcgccttcgttccgatctctggatggcatggagacaac
atgctggaggccagctcaaacatgagctggttcaagggctggaagattgagaggaaggaa
ggtgctgccaatggtgtaactcttctcgaggccctggactccattctgccacccagtcga
cccaccgacaagcctcttcgcttgcctctgcaggacgtgtacaagattggaggtattgga
actgtgcccgtgggtcgtgttgagaccggaactctgaaggctggcatggttgtgaccttt
gcccctgccaacgtgaccactgaggttaaatctgttgagatgcaccacgagtcccttgtc
gaagctcttcccggtgacaacgttggcttcaacgtcaagaacgtgtccgtcaaggacatc
cgtcgtggaaacgtggctggagacagcaagaacgacccaccaatggaggctggcagcttc
acggctcaggtcatcatcctgaaccaccctggtcagatctctcagggctacgccccagtg
ctggactgccacactgctcacatcgcctgcaagttctctgagctcaaggagaaaatcgac
cgtcgttctggcaagaagcttgaggacaaccccaaggctcttaaatctggagatgctgcc
attatcctcatgatccctggcaagcccatgtgtgtggagagcttctctcagtacccacca
ctgggtcgttttgctgtgcgtgacatgaggcagaccgttgctgttggtgtcatcaaggct
gttgacaagaaagcgtcctctgctggcaaggtcaccaagtctgctcagaaggctgccaaa
gctaaatga
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