KEGG   Pimephales promelas (fathead minnow): 120485212
Entry
120485212         CDS       T08155                                 
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120485212
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pprm03019]
    120485212
   03016 Transfer RNA biogenesis [BR:pprm03016]
    120485212
   03012 Translation factors [BR:pprm03012]
    120485212
   04131 Membrane trafficking [BR:pprm04131]
    120485212
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pprm04147]
    120485212
Messenger RNA biogenesis [BR:pprm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     120485212
Transfer RNA biogenesis [BR:pprm03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    120485212
Translation factors [BR:pprm03012]
 Eukaryotic type
  Elongation factors
   120485212
Membrane trafficking [BR:pprm04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    120485212
Exosome [BR:pprm04147]
 Exosomal proteins
  Proteins found in most exosomes
   120485212
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 Gtr1_RagA GTP_EFTU_D4
Other DBs
NCBI-GeneID: 120485212
NCBI-ProteinID: XP_039536768
LinkDB
Position
Unknown
AA seq 462 aa
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPPYSQKRYEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEASSNMSWFKGWKIERKEGAANGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMVVTFAPANVTTEVKSVEMHHESLV
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGSFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIILMIPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKAVDKKASSAGKVTKSAQKAAKAK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgggtaaggaaaagattcatattaacatcgtggttatcggccacgtcgattctggcaag
tccaccaccaccggacatctcatatacaaatgtggaggtatcgataagagaaccatcgag
aagtttgagaaggaagctgctgagatgggcaagggctccttcaaatatgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcacaattgatatttctctctggaagttc
gagaccagcaagtactatgtcaccatcattgatgcccctggacacagagacttcatcaag
aacatgatcactggtacttctcaggctgactgtgccgtgctgattgttgctgctggtgtt
ggtgagtttgaggctggtatctccaagaacggacagacccgtgaacatgccctgcttgcc
tacactctgggagtgaaacagcttattgttggaatcaacaagatggactccaccgagccc
ccctacagccagaagcgttatgaggaaatcaccaaggaagtcagcgcctacatcaagaag
atcggctacaaccccgccaccgtcgccttcgttccgatctctggatggcatggagacaac
atgctggaggccagctcaaacatgagctggttcaagggctggaagattgagaggaaggaa
ggtgctgccaatggtgtaactcttctcgaggccctggactccattctgccacccagtcga
cccaccgacaagcctcttcgcttgcctctgcaggacgtgtacaagattggaggtattgga
actgtgcccgtgggtcgtgttgagaccggaactctgaaggctggcatggttgtgaccttt
gcccctgccaacgtgaccactgaggttaaatctgttgagatgcaccacgagtcccttgtc
gaagctcttcccggtgacaacgttggcttcaacgtcaagaacgtgtccgtcaaggacatc
cgtcgtggaaacgtggctggagacagcaagaacgacccaccaatggaggctggcagcttc
acggctcaggtcatcatcctgaaccaccctggtcagatctctcagggctacgccccagtg
ctggactgccacactgctcacatcgcctgcaagttctctgagctcaaggagaaaatcgac
cgtcgttctggcaagaagcttgaggacaaccccaaggctcttaaatctggagatgctgcc
attatcctcatgatccctggcaagcccatgtgtgtggagagcttctctcagtacccacca
ctgggtcgttttgctgtgcgtgacatgaggcagaccgttgctgttggtgtcatcaaggct
gttgacaagaaagcgtcctctgctggcaaggtcaccaagtctgctcagaaggctgccaaa
gctaaatga

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