Pimephales promelas (fathead minnow): 120485235
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Entry
120485235 CDS
T08155
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprm01009
]
120485235 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120485235 (ctdp1)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120485235 (ctdp1)
Protein phosphatases and associated proteins [BR:
pprm01009
]
HAD phosphatases
Fcp/Scp phosphatases
120485235 (ctdp1)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120485235 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
BRCT
PTCB-BRCT
Biotin_lipoyl
LIG3_BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
120485235
NCBI-ProteinID:
XP_039536808
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MEESVDSGGAAPEGPTVQVTEIRYPAGARPLRLLEWKVKPGARVNVDSVIAVCAPITAES
ESRAPERKLKSDRAGVVRELCCQLGQVIAPGGVIAKVEECSHPVVMKGLCAECGQDLTQL
QSKNGKQQVPISTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLI
HTTEQHCQRMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAH
TIAGFLDPEKKLFSHRIMSRDECIDPYSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNL
ITVKKYIYFQGTGDINAPPGSREAQMAKKGSQAGRPSENLESSGQEEQRNGLRKSSKDRK
TGHEELSSVTTTTQGASANERTHSTGESESRDDKCNVKTEGEGSSGVTSTSGETDFPNTA
ANDLDFDLSSDSESEGKMGLSDSDGEGQPVDAGKTKQTKTEECKIKEDDGDKPRTEGDDI
PETDPEGLGDLGNGCSDKKEVETESQNSEQSAVTMGEESLDHSMEDEDDEEEEDIDQDDH
LIYLEEVLVRIHTEYYSRYEAFLRKESSETPDIRKIVPELKGRTLEGATIIFSGLYPTNY
PMERTREWYHAKALGAKIGKTLVLNDKDPNRTTHLIAARAGTEKVRQAQDCKHLHVVNPD
WLWGCLERWERIEEQLFPLKEDYNKSHRSSSPAAFLDLQGSVPRPLFQAPPVQHKSLAPP
EMRTYDPVTGKLIRRGPQASRPPSYLRSHGSSMSTKGDMSTLRSGQGSQERDAAAGSSAD
DEQPGPSRRKRQPSMSESMPLYTLCKEDLDSMDKEVDDMLGEESDNESDGKGKERMEAEE
DEEERLPTSKQKAPSSDHGSPLATVVEENAQTSTREDASVTGNMFRGCKRKLEEARDDND
DDEDCGGSSKDSNEEGSSSEADEMAAALDAELNDFM
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtcggtagactccggcggtgcggcaccagagggccccacggtgcaggtgacg
gagatccgctaccccgctggagcgcgtcccttgcggctgctcgagtggaaggtgaaaccc
ggagctcgggtgaacgttgactctgtcatcgcggtttgtgcgcctataaccgccgaaagc
gagtcgagagcgcccgagaggaagctgaagtcggaccgcgctggagttgtgcgggaactg
tgctgtcaactcgggcaggtcattgcgcctgggggtgtgatagcaaaagtggaagaatgc
agtcatcccgttgtaatgaagggcttgtgtgcagaatgtggccaggacttaactcaactt
cagagcaagaacggaaagcagcaggtgcccatctctacagcgaccgtctccatggtgcac
agtgttcccgagctgatggtcagctcagagcaagcagagcagcttggccgagaggaccag
caaagacttcacaggaacaggaagttagtgctgatggtggatctggaccaaacgctgatc
cacaccactgaacagcactgccagcggatgtccaacaagggaatctttcatttccagcta
ggacgaggggagcctatgcttcatacacgactgcggcctcactgcaaagactttctagaa
aagatcgccaaactctatgagctgcacgtcttcacctttggcagccgtttatacgctcac
accattgcaggttttttagaccctgaaaagaaactcttctcacatcggatcatgtctaga
gatgaatgcatcgacccctactctaagactggcaacctcagaaatttgttcccctgtgga
gactccatggtgtgcatcatagacgatagagaggatgtgtggaagttcgcccccaacctc
atcacagtgaagaaatatatctacttccagggcaccggtgacatcaacgccccaccgggc
tctcgagaggcccagatggccaaaaaaggtagccaggctgggcgaccttcagagaacttg
gaatcatcaggacaggaggaacagagaaacggcctcaggaaatccagcaaagacagaaaa
actgggcatgaggagttgtcctctgtcaccaccactactcagggagcttcagccaatgag
aggactcattccacaggggagagtgagagcagagatgacaagtgtaatgtgaaaacggag
ggcgagggcagctcaggtgtgacatctacctcaggtgagactgacttcccaaacactgct
gccaatgatctggattttgacctctcgagcgacagcgaaagcgagggtaaaatgggatta
tctgacagtgatggcgaaggccagccagtggacgctgggaaaaccaaacaaacaaaaaca
gaggagtgtaaaatcaaagaggatgatggggacaaaccgaggacagagggggatgatatc
ccagaaacagatcccgagggtctcggtgatttaggcaacggctgttccgacaagaaggaa
gttgaaacagagtctcaaaacagtgagcagtcagctgtcactatgggtgaggagtcttta
gatcacagtatggaggatgaggatgatgaggaagaggaagatattgaccaggacgaccac
ctcatttacttggaggaggttttggttcgaatccacactgagtattactcacgctatgag
gccttccttaggaaagaaagttcagagactccggacattcgaaaaatcgttccggaactg
aaaggccgcacgctggagggcgctacgatcattttcagcggcctgtatcccaccaactac
ccaatggagcgcacgagagagtggtatcacgccaaggcactgggtgccaagattggcaag
accttggtgctcaatgacaaagaccctaaccgcaccacccaccttatcgctgcacgtgca
ggtacagagaaagttcgtcaagctcaggactgtaaacatcttcatgtagtaaatcctgat
tggttgtggggctgcttggagcgctgggagcgaatagaggagcaactctttcctctcaaa
gaggactataacaaatcacacaggagcagtagtcccgccgcatttctagacctccagggg
tccgtcccgaggcctctcttccaggcccctcctgttcagcacaagtctcttgcaccaccg
gaaatgcggacctatgaccccgtcaccggcaaactgatccgccggggtccccaggcctcc
cgtccaccctcttatctgcgctcgcatggatcgtccatgtcgactaaaggagatatgtcc
accctcaggtcaggtcaggggtctcaggagcgggacgcggctgcaggatcgagtgctgac
gacgagcagcctggaccttcacgcaggaaacgacagcccagcatgtctgaatccatgcca
ctctacacactctgcaaagaagatctggacagcatggataaagaggtggatgacatgctc
ggggaggagagtgacaatgaaagcgatggaaaagggaaggaaaggatggaggcagaggag
gatgaggaagagagactccccacgagcaagcagaaggccccatcatcagatcacggttcg
ccacttgccactgttgttgaggaaaatgcccaaacatcaaccagagaagacgcctctgta
acagggaacatgttcaggggctgcaaaagaaaactggaagaggccagagatgataatgat
gatgatgaggactgtggcggctccagtaaagattccaatgaggagggcagcagctccgag
gcggacgagatggccgctgcgctggatgcggagctaaacgatttcatgtga
DBGET
integrated database retrieval system
