Pimephales promelas (fathead minnow): 120485241
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Entry
120485241 CDS
T08155
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120485241 (vps50)
Membrane trafficking [BR:
pprm04131
]
Protein recycling
Others
EARP complex
120485241 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
120485241
NCBI-ProteinID:
XP_039536820
LinkDB
All DBs
Position
Unknown
AA seq
987 aa
AA seq
DB search
MQKIKSLMSRQGLKSPQESVVDMSPVQSFRSPSKEELRELREQPTDPLAEQELIDNIEEV
YFSSDSFDMVQYELEKLPPDLNLLELEEYRDKLKRQQAAVSKRVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLRSAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYNCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFEVSHYTKVQLAYKLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCKHITTDSYIPCLTDLCKALWEVMLSYHLTMQWHDEHYKEETTPDDSS
AEGSDESTVDRSYVKKKLEHGLTRIWQDVQLKVKAYLLGTDMSNFKYDDFIVVLDVISRL
MQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFSIAQ
LHEFKFMGQCRSPSVSPSRQPDSVELLELSLFEQFLQGGNPFEMQIDNKEEETEDVLASN
GYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPVKSVSRETLRSRKRSDYNLNRA
NAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDMHYQ
SATLPSQSSQPGVSRQTIPGYWYESSGLGLISSRLRTTLSRIQESLIDVEAGGESTGPHV
SPEERKEKVPSPHLSQLVILTASETLYGLAERVVATESLVFLAEQFEFLQPHLDTMMPSA
KKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNIYVD
VLLKEFEKFNQRMGDVSKIVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRALM
QLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLTNLVT
VCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctctgatgtcccgtcagggtctgaaaagtccccaggagagtgtg
gttgacatgagcccggttcagagcttcaggagccctagcaaggaagagctgagggaactg
agggagcagcccaccgatccactggcagaacaggaactcattgacaacatagaggaagtg
tatttctccagcgactcctttgacatggtgcaatacgagctcgagaaactccctccggat
ctgaatcttctggagcttgaagagtacagagataagctgaagagacaacaagcagctgtt
tctaaaagagtggcagacctcattttggagaaacagccttcctatgttaaggagctggag
agagtgacgtctctgcagaccaacctgcagctggccgcagtcatctgcactaatgcacga
aggcagcttcgttctgctaaagaaggctttaccgaagccagccttgggctgttggccaat
cagagacgccgacagctgttgacaggattgctgaagtctttgaggaccataaagactctg
caaagaactgatgttcgactgagtgaaatgctagaggaggaggactatccaggcgccatc
cagctgtgtctggaatgccaaaaggccgccagcacattcaagcactacaactgtataagt
gagttgaattccaaactgcaagacactctggagcaaatcgaggaacaactagatgtggcg
ctgtccaaaacctgcaagcactttgaggtttctcactacaccaaagttcaactggcatat
aagcttctcggcaagacgcagacggccatggatcagttgcacatgcacttcacccaggcc
atccacaacactgtgttccaggtggtgctgggatatgtagagctgtgcgccggcaacgcc
gataccaagttccagaaaatgcagtacaaggacctttgcaagcacattaccaccgacagc
tacatcccctgcttgaccgacctctgcaaggccttgtgggaggtgatgctcagttaccat
ctaaccatgcagtggcacgatgagcactacaaagaagagaccactcctgatgactccagc
gcagagggctcagatgaatccaccgtggaccgcagctatgtgaaaaagaagctagaacat
ggtttaacgcgaatctggcaggacgtccaattgaaagtgaaagcctatttgctggggaca
gacatgtccaacttcaagtacgacgacttcattgtggttctggatgttatcagcaggttg
atgcaagtgggagaggaattctgcggcagcaagtccgaggtgttgcaggagtccattaag
agacaaagcgtgaactactttaagaactatcaccgaactcgcctggaggagttgcggatg
ttccttgaaaatgaaacctgggagttgtgccctgtgaagtctaacttcagtattgcccag
ctccacgagttcaagttcatgggtcagtgtcgttctccctcagtatctcccagcaggcag
cctgattccgtagaactgctggagctgtctctgtttgagcagttcctgcagggaggaaat
ccttttgagatgcagatcgacaacaaggaagaggagaccgaggatgtcctggcttctaat
gggtacgagtcagatgagctggaaaagagtgtgtatcaggactacgacagtgacagtgat
gtacctgaggagctgaaacaagactatgtagatgaacagacaggagacgctccagtgaag
agcgtgtccagagagacacttcggagccggaaaaggtccgactacaatctgaaccgagcc
aatgcccccatccttaccaacaccaccctcaacgtgattcgcctggtcgggaaatacatg
cagatgatgaacattttgaagcccattgcctttgatgtcatccactgtgtgtctcagctc
tttgattactacctgtatgccgtctacaccttctttggccgcaatgacatgcactaccaa
tctgcaactctgccttcacaaagctctcaacctggtgtgtccagacagacaatccctggt
tattggtatgaatcctctgggctgggtttgatcagcagcagactgaggactacgctcagc
cgaatccaggaaagcttaatagacgtggaggctggaggggagagcacaggtcctcatgtg
tctcctgaggaaaggaaggagaaggttcccagtcctcatctcagtcagctggtgatcctg
acggccagtgagacgctctatggtttggctgagagagtcgtcgccactgaatcactagtc
tttctggcggagcagtttgagttcctccagcctcatctcgacaccatgatgccttcagcc
aagaagcccttcctccagcagttctactcacagactgtatctacagccagcgagctccgc
aaacccatttactggattgtggcggccaaagccatagattacgaacagatgctgttgctg
atggctggagtgaaatgggacattaaagagataatgtcacagcacaacatctatgtggat
gtccttttaaaggagtttgagaagttcaaccaaagaatgggagatgtgtcgaaaatagtc
cggattcctctgccagtgtccaatgtcttatgggagcactgcatccgtctggccaacagg
acattagtggagggctatgctaatgtgaagaaatgcagtaatgaaggacgtgcactgatg
cagctggacttccagcagttcctgatgaagctggagaagctcaccgacctcagaccgatt
ccagacaaggagtttgtagagacctacattaaagcatactacctaactgagaacgacatg
gagcagttcatcaaaaaccacagggagtactctatgaagcagctgactaacctggtcacc
gtctgcctcgggtcccacatcaacaagaaagcacgacagaaactcctcgcagcgatcgat
gacattgacaggccgaaaagataa
DBGET
integrated database retrieval system
