Pimephales promelas (fathead minnow): 120485328
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Entry
120485328 CDS
T08155
Symbol
zgc:91944
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120485328 (zgc:91944)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120485328 (zgc:91944)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
HlyD_D4
Motif
Other DBs
NCBI-GeneID:
120485328
NCBI-ProteinID:
XP_039536961
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MRQWCLPAVAPRAEPLPTGRLSPQISDVRMECCDVEPRYTIEQIDLLQRLRLSGMTKPQI
IQALESLERLDPDHRVPCCNNHSAPPSAPTSAAPAAPSSSSSSSSSLTSATTQTPVIDAA
LSPSNSYDASPPPLYPPSGVQRSFSYDLAEEDWDLEEKVEEYMRRDSNLVKEEIKAFLNN
RRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNSPGIRWSENQHAQ
VPRSRTDTPWNRQRELLMHLLPWYSAHQAQSGTTLSMRSLVKEEPDWRLAASPADRAAVG
PFRLRRGSRFTWRKECQSIMESFFIENQYPDEAKREEIANACNAVIQKPGCKLSEFERVT
ALKVYNWFANRRKEMKRRANIEAAILESHGIEVPSPSCHSNSEEIETQEFGDQVMSQRFS
EQVEDLSQRKDIEPEGAMLPPVEVVSLPSPASQLMERKLDESKREAIDDD
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtgccttcctgctgtggctccacgcgcagaaccgctcccaacgggccga
ttatcacctcaaatatcagatgtcaggatggagtgttgtgatgtggagccgcggtatacc
attgaacagatcgacctgctccagcgtttaaggctgtccgggatgaccaaacctcagatc
attcaagccctcgagtctttagagaggcttgatccagaccatcgtgtcccatgctgcaac
aatcactcggccccacccagcgcccctacctccgcagcccctgctgccccctcgtcctcc
tcctcttcctcctcctctcttacctcagccaccacacagacccctgtcatagatgctgca
ttatcacccagcaacagctacgatgcctcgcctccacccctatacccacccagcggagtt
cagaggtcgtttagttacgacttggcagaagaggactgggatctggaggagaaggtggag
gaatacatgaggagagacagtaaccttgtgaaagaagagataaaagcttttctcaataac
agaaggatctcacaggcaattgttggacaagtcacaggtatcagtcagagctacatctcc
cagtggcttctgcagcaggggcttgagatgagcgactccaaacgcagggcattctatcgc
tggtacctgctggagcgtaacagcccaggaatcagatggagtgaaaaccagcatgctcag
gtccccaggagcaggactgacaccccctggaataggcagagagaactgctgatgcacctc
ctcccctggtactctgctcaccaagcccagtcaggcaccacattgtccatgcgttccctg
gttaaagaggagcccgactggaggttggctgcaagccccgctgacagggcagcggttggg
ccttttagactgcgcagaggtagtcgcttcacctggagaaaagagtgccagtcaatcatg
gagagtttctttattgagaatcagtatcctgatgaggccaaaagagaggaaattgccaat
gcctgtaatgctgtcattcaaaaacctggatgcaaactgtcagaatttgaacgagtcact
gcgctcaaagtgtacaactggtttgccaatcggaggaaggagatgaagagacgtgccaac
atagaggctgccatactagagagccatgggatagaggtgccgagccccagctgccactcc
aacagcgaagagattgagactcaggagtttggagatcaagtcatgagccagcgtttctct
gagcaggttgaggatctctcccagagaaaagacattgagccagaaggtgccatgctacct
cctgtggaagtggtgtctcttccaagcccggcctctcaactcatggagcggaaactggat
gaatctaaaagagaggctattgatgacgattaa
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