Pimephales promelas (fathead minnow): 120485340
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Entry
120485340 CDS
T08155
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120485340 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120485340 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120485340 (vps28)
Membrane trafficking [BR:
pprm04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
120485340 (vps28)
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120485340 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
120485340 (vps28)
Exosomal proteins of colorectal cancer cells
120485340 (vps28)
Exosomal proteins of bladder cancer cells
120485340 (vps28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS28
ADSL_C
DGT4
Motif
Other DBs
NCBI-GeneID:
120485340
NCBI-ProteinID:
XP_039537024
LinkDB
All DBs
Position
Unknown
AA seq
223 aa
AA seq
DB search
MFHGIPASGVMGGAPANKQELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTGACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VSLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacggaatacctgcttctggagtgatgggaggagcacctgccaacaagcaagaa
ctgtatgaggaggtgaaattgtacaaaaatgccagagaaagggaaaagtatgacaacatg
gcagagttgtttgctgtggtcaaaaccctccaggccctggaaaaagcctatattaaggac
tgtgtgactccaaacgaatatacaggagcttgctcaagattgcttgtccagtacaaggct
gctttcaaacaagtccagggatcagatgtgggctccatcgatgacttttgtcggaaatat
aggctggactgtccactggctatggagaggatcaaggaggatcgaccaatcaccattaag
gatgacaagggcaacctgaaccgctgcattgcagacattgtttctctttttatcacagtg
atggacaaacttcgacttgagattcgtgccatggatgagatccagcctgatctgagggag
ctcatggagaccatgaaccggatgagcaacatgcctccagattcggaggccaaagacaaa
gtcagcctctggttaaccacactgagcagcatgtctgcgtctgatgagctggatgactct
caggttcgccagatgctgttcgacctggagtccgcatacaacgccttcaaccgtttcctg
cactcgtcttaa
DBGET
integrated database retrieval system
