Pimephales promelas (fathead minnow): 120485359
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Entry
120485359 CDS
T08155
Symbol
abcf1
Name
(RefSeq) ATP-binding cassette sub-family F member 1 isoform X1
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pprm03012
]
120485359 (abcf1)
Translation factors [BR:
pprm03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
120485359 (abcf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_29
AAA_18
AAA_14
NACHT
AAA_22
AAA
RsgA_GTPase
AAA_28
AAA_24
AAA_16
AAA_5
ABC_tran_Xtn
NB-ARC
MMR_HSR1
AAA_25
cobW
AAA_23
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
120485359
NCBI-ProteinID:
XP_039537046
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MPKKSKEVAEWEGDDEQPQQQQQTDKHIKKGKKDKKGKKSFFEELASDTKPDKEQPPVKE
AQGKQPQKKKKDRRKGKAGGDDDDDDDDSEVMQRLKKLSVQASDEDEEEVVAPVKGGKRN
KGGNIFAALSQGKSDDDDDDEDDAGGDDDDDDGDDDDEKPKNKKSSKEVEKVTKGKKKDK
AKPKITKEASEDEQDEGMEKKDENEKKGGKKGKKAAAKPSKEEDKPEVKELEKPQKKDEV
EVKEQEKSQKKGKKEQPKKGKPARPPPPPSDDDDDEEEEEKSDDNDIMMSAEDGLAAEQA
KEKPDDPFANMSKKEKKKKKKMMEYQRQVDSLRVQDAIEGDFSVSQAELSSRQAMLENAS
DIKLERFSISAHGKELFVNADLLIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDV
LLCEQEVVADDTPAVQAVLKADTRRLKLLEDERQLQSRLEKGDDSVAERLDKVYEELRVI
GAAAAEAKARRILAGLSFTPEMQNRPTRKFSGGWRMRVSLARALFMEPTLLMLDEPTNHL
DLNAVIWLNNYLQSWKKTLLIVSHDQSFLDDVCTDIMHLDNQKLYYYRGNYLTFKKMYVQ
KQKELLKQYEKQEKKLKDLKAGGKSTKQAEKQTKDILTRKQQKGKKKGQEEESREMPELL
KRPKEYTVKFTFPNPPPLSPPILGLYSVEFGYEGQKPLFKNVDFGIDMESRICIVGPNGV
GKSTLLLLLTGKLNPSKGEMRKNHRLKVGFFNQQYADQLNMEESPTEYLQRNFNLQYQDA
RKCLGRFGLESHAHTIQISKLSGGQKARVVFAELSCRQPDVLILDEPTNNLDIESIDALS
EAVNEYKGAVIIVSHDARLITETQCHLWVVEDQSINQIDGDFEDYKREVLEALGETLVNK
PKTE
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaaatcaaaagaagtggctgagtgggagggtgatgatgaacaaccacaacaa
caacaacaaacagacaaacatatcaagaaaggaaagaaggataagaaagggaaaaagagt
tttttcgaggagctggcatcagatactaaaccagacaaagagcagccaccagtgaaagag
gcacaagggaaacagcctcagaagaaaaagaaagacagacgaaaagggaaagcaggagga
gacgacgacgacgacgatgatgattcagaggtcatgcagcgtctcaagaaactgtcagtc
caggccagtgatgaagatgaggaagaggttgttgctccagtcaaaggaggaaagcgaaac
aaaggtggcaacatatttgctgctctgagtcaggggaaaagtgatgatgatgatgatgat
gaagacgacgcaggtggagatgacgacgacgacgatggtgatgacgacgacgagaaaccc
aaaaacaaaaagagttctaaggaagttgagaaggtaaccaagggcaagaaaaaagataag
gctaaacctaagataacgaaggaggcctctgaggatgaacaagatgaagggatggagaaa
aaagatgagaatgaaaagaaaggagggaaaaagggcaagaaagctgctgctaaaccatct
aaggaggaagataaacctgaagtgaaagaactagagaagcctcagaagaaagacgaagtt
gaagtgaaagaacaagagaagtctcagaagaaaggcaagaaggagcagcccaagaaagga
aagcctgctcgccctcctcctcctcctagtgatgatgatgatgatgaagaggaggaagaa
aagagtgatgacaatgacataatgatgagtgcagaggatgggctcgcggctgagcaagcc
aaagagaaaccggacgacccttttgctaacatgagtaaaaaagagaagaagaagaaaaag
aaaatgatggagtatcaacgtcaggtggatagtctgcgtgttcaggacgctatagaggga
gacttctccgtctctcaggctgagctgtcctctcgacaggccatgctggaaaacgcctct
gacatcaagttagaaagattcagcatttcagctcacggtaaggagctgtttgttaacgca
gaccttctgatcgttgccggaagaagatacggtctggttggaccaaatgggaaagggaag
accactctattgaagcacatcgctaacagagctctcagcattcctcccaatattgatgtc
ctgctttgtgagcaagaggtggtagcggatgacactcctgctgttcaggcggttctgaag
gcagacacacgcagactgaagctcctggaggatgaacggcagctacagagtcgactggag
aaaggagacgacagcgtggccgagaggctcgataaggtgtatgaggagttgagggtgatc
ggagcagcggcagcggaggctaaagctcgtaggatcttggctggtctgtctttcactcca
gagatgcagaacagacccaccaggaagttctctggtggatggaggatgagagtgtccctg
gctagagcgttgttcatggagcccactctgctgatgctggacgagcccactaaccacctg
gaccttaacgctgtcatctggcttaacaattacttgcagagctggaagaaaacgcttcta
atcgtgtcccacgaccagagtttcttagatgacgtctgtacagatatcatgcacctggac
aaccagaaactctactactataggggcaactatctaacgtttaagaagatgtacgtacag
aaacaaaaagaactcctgaagcagtacgagaaacaagagaaaaagctcaaagacctgaag
gctggaggaaagtccacaaagcaagctgagaaacagactaaagacattttgacgaggaaa
cagcagaagggtaagaagaaaggccaggaggaggagagccgtgagatgccagagctcctc
aagaggccgaaagaatacaccgtcaaattcactttccccaaccctcctccactctctcca
ccaattctaggcctttacagtgttgaatttggttatgaaggccagaaacctctgttcaag
aacgtagactttggaattgacatggagtctagaatatgtattgttgggccaaatggagtt
ggtaagagtacactccttctgcttttgaccggaaaattaaatccttctaaaggagagatg
aggaagaatcatcgattgaaagtagggttcttcaaccagcagtatgctgatcagttgaac
atggaggagtctcccacagaatacctccagaggaatttcaatctccagtaccaggacgca
aggaagtgcctgggtcgctttgggttagagagccatgcacacaccatccagatctccaaa
ctatctggtggtcagaaagcaagagtggtatttgctgaactttcttgtcggcaacctgac
gtcctcatcttggatgagcccacaaataacttggacattgagtcgattgatgcattgtca
gaagccgtcaatgaatacaaaggagctgtgataattgtgagccatgatgccaggctgatc
acagagacccagtgccatttgtgggtagtggaggaccagtcaatcaaccaaattgatgga
gactttgaagactacaagagagaagttctggaggcccttggagaaaccctggtcaacaag
cctaaaactgagtaa
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