Pimephales promelas (fathead minnow): 120485628
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Entry
120485628 CDS
T08155
Symbol
top2b
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprm03032
]
120485628 (top2b)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120485628 (top2b)
Enzymes [BR:
pprm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
120485628 (top2b)
DNA replication proteins [BR:
pprm03032
]
Eukaryotic type
DNA Topoisomerases
120485628 (top2b)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
120485628 (top2b)
Centrosome formation proteins
Centriole proteins
120485628 (top2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
120485628
NCBI-ProteinID:
XP_039537377
LinkDB
All DBs
Position
Unknown
AA seq
1666 aa
AA seq
DB search
MSNGAAGSGGLTWVTLFDKNNGAKKEEVNGRGDAVKSEAGKKESSKKMSVERIYQKKTQL
EHILLRPDTYIGSVEPVTQQMWVFDEEIGMNLREITFVPGLYKIFDEILVNAADNKQRDK
NMTTIKITIDPESNTIAVWNNGQGIPVVEHKDEKMYVPALIFGHLLTSSNYDDNEKKVTG
GRNGYGAKLCNIFSLKFTVETACKEYKRSFKQTWQENMGKTSEAKIKNFDGDDFTCVTFQ
PDLAKFKMEKLDKDIVALLTRRAYDVAGSCRGVKVMLNGKKLPVNGFRSYVDLYVKDKLD
ETGVALKVVNEAVNERWEVCLTMSEKGFQQISFVNSIATTKGGRHVDYVVDQIVSKLIEV
VKKKNKAGVSVKPFQVKNHLWVFVNALIENPTFDSQTKENMTLQTKSFGSKCALTEKFIR
SATNCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGKHSSDCTLILT
EGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEINNIIKIVGLQYKK
SYEDPESLKSLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHTFLEEFITPIVKA
NKNKQAVSFYSIPEFEEWKKHTDNFKTWHIKYYKGLGTSTSKEAKEYFADMERHRIMFKY
NGTEDDAAITLAFSKKKTDDRKEWLTNFMEDRRQRRIHGLPEQYLYGTTTRHLSYNDFIN
KELILFSNSDNERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHG
EQALMMTIVNLAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPA
VDSSLLKFLYDDNQKVEPEWYIPIIPLVLVNGAEGIGTGWACKIPNYDPREIVNNISRML
NHQDPLPMLPSYKNFKGIIHELGQNQYVVSGEVSVLDKNTIEIIELPVRTWTQAYKESVL
EPMLQGTDKTPPLINDYKEYHTDTTVKFVVRMTEEKLAQAEAAGLHKVFKLQSSLTCNSM
VLFDHMGCMKRYESVQDILKEFFELRLHYYKLRKDWLVGSLGAESAKLSNQARFVLEKIE
GKLSIENKSKRDLIRMLVQKGFESDPVAAWNKAQEKSLEDEDGEGNDSDISVDSGSTSGP
NFNYILNMPLWCLTKEKVEELLKQKDLKKAELNELQNKNAEDLWREDLSVFIEELDRIEG
QERESVNSGKATKLVKGKVGKPKVKKMHLEETLPSPFGRRIEPQVTQAMKADASKKLTKK
KKSEVDPAFKLEFDEDSVLGSNGGENSLISPSGLPIPGAKPKAPRVKREKKEPGAPKQRK
PSGAKGPAKKVKKRNPLSDDECNDRSENELDESEPVIPRDTTSRRASGAPKQRKPSGAKG
PAKKVKKRNPWSDDECDDDRSENELDESEPVIPRDTTSRRASAVKAKYTFDFSEEEEGGD
EEQENDGSASPVLSYKNTERQNDDEEDDGDIFPPKTTFTLPTSPAKKRDPVPVLSSKTEY
ADKSSDDDGKSDSDDDRGPVFSSISNSSVFEKPPPKKVKKPAEMAPKQKKVPVKAKKPDT
SVWDSDSDTGTKKASAAPKGGGKGRGRKRKQSSSEEEVYNPVKKTGKTATSRKPKKAVSD
DEEDDDASMNSFSRLDSGRDRSGRAKKEVKYFAESDNDDDDDDMFD
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacggtgcagcggggagtggaggcttaacctgggtgaccctctttgacaagaac
aatggtgcgaagaaagaggaagtgaacggccggggagatgcagtgaagagtgaggcgggc
aagaaagagagctctaagaagatgtcagtggagaggatctaccagaagaagactcaactc
gagcatatcctcctccgtccagacacctatatcggctccgtggaacctgtcactcagcaa
atgtgggtttttgatgaagaaattggaatgaatttgagggagatcacgttcgtccctgga
ttatataaaatctttgatgagatccttgtcaatgcagctgataacaaacaaagagacaag
aacatgaccaccatcaaaatcaccatcgacccagagtccaacaccattgccgtgtggaat
aatgggcagggaattcctgttgttgaacacaaagatgagaagatgtacgtacctgcactg
atctttggacacctcctcacctctagcaactatgatgacaatgagaaaaaagtcacaggt
ggcaggaatggatatggtgctaaactctgtaacatattcagcctaaagtttacagtagag
acagcctgcaaggagtacaaacgcagcttcaaacagacatggcaggagaacatgggaaag
accagtgaggcgaagatcaaaaactttgatggggatgacttcacgtgtgtcaccttccag
cctgatctggccaaattcaagatggagaaactggataaggacattgtggctttgctaaca
cgcagggcgtatgatgtggctgggtcttgtaggggcgtcaaagtcatgctcaatggaaag
aagctacccgtgaatggtttccgcagttatgtggatctctatgtgaaggataaactggat
gagacgggagtcgctctaaaggtggtgaatgaggcggtgaatgagcgctgggaagtgtgt
ctcaccatgagtgagaagggcttccagcaaatcagctttgtcaacagtattgcaaccacc
aagggaggaagacatgttgactatgttgtggaccaaattgtgtcgaaactgattgaagtg
gtgaagaagaagaacaaagctggagtctctgtgaaaccattccaggttaaaaaccatctg
tgggtatttgttaatgccctgatcgagaacccaacttttgattcccagactaaggagaac
atgactctacagaccaaaagctttggctcaaaatgtgctctcactgagaaattcattaga
tctgccacaaattgtggtattgtggagagcattctgaactgggtgaagtttaaggctcag
acacagctcaacaagaaatgctcctctgtcaaacacagcaagattaaaggaattcccaaa
ctagatgatgccaatgatgctggggggaaacattcttcagattgcactctgatcctgact
gagggagattcagccaagtctctggctgtgtccggtttaggagtgatcgggcgagatcga
tatggggtgtttccgctcaggggaaagatcctcaatgtgagggaggccacacacaagcag
ataatggagaatgcggaaatcaacaacattattaaaattgtgggtcttcagtacaagaag
agctatgaagatccagagtccctgaagagcttacgctacggaaagattatgatcatgacg
gatcaggatcaagatggctctcacatcaagggtcttctcattaacttcttccatcacaac
tggccatctctgctgaagcacaccttcctggaggagttcatcacacccattgtgaaggcc
aataagaacaaacaggcagtatcgttttacagcatcccagaatttgaagaatggaagaag
cacacagacaattttaaaacttggcacataaagtactataaaggtttgggtaccagcaca
agcaaagaagcaaaggaatattttgctgacatggaaagacatcgaattatgttcaagtac
aatggcactgaagatgatgcagccattacactggctttcagtaagaagaaaacggatgac
aggaaagagtggcttactaatttcatggaagacaggcggcagaggaggatacatggactg
cctgagcaatacctgtacggcacaacaacacgacacctttcctacaatgacttcatcaat
aaagaactcatcctcttctccaattctgacaatgagcgttcgattccatcgcttgttgat
ggtctgaagccaggccagaggaaggtgttgttcacctgtttgaagaggaatgataaaagg
gaggttaaggtggcccagctggccggatccgtggctgagatgtctgcataccatcatggt
gaacaagccctgatgatgactatcgtgaatttggcccagaactttgtgggcagcaacaat
gtcaacattcttcagcctcttggccagtttggtacccgtatcaatggcggtaaagatgct
gccagccctcgttacatcttcactatgcttagtccattggccaaactgctgtttcctgct
gtggactccagcctgttaaagtttttgtatgatgacaatcagaaggtggagccagagtgg
tacatacccataattcccttggtactggtaaacggagctgagggtatcgggactggctgg
gcatgcaagatccccaactatgacccgcgagagattgtcaacaacatcagccgtatgctc
aaccaccaggaccctctacccatgctgcccagctacaagaactttaaaggtatcattcat
gagctgggacagaaccaatatgtggtcagtggagaagtgtccgtcctggacaaaaatacc
attgagattattgaacttcctgttcgcacctggactcaggcatataaggagtcagttctt
gagcccatgctccaaggaacagataaaactcctcctctgatcaacgactataaggaatac
cacaccgacaccacagtgaagttcgtggtgcgcatgacagaggagaagctggcacaggct
gaggcggccggccttcacaaggtcttcaaattacagtcgtccctcacctgcaactccatg
gtgctgtttgatcacatgggctgtatgaagcgctatgagtctgtgcaggatatcctgaag
gagttctttgagctgcgcttgcactattataaactgaggaaggactggctggtgggcagt
ctgggcgctgagtcggccaaactctccaaccaggcacgatttgtgcttgagaagattgag
ggaaaactatcaatcgagaacaagtcaaaaagagatttgatccgaatgctggtgcaaaaa
ggatttgaatctgaccccgtggctgcctggaacaaagcccaggagaagtctttggaggat
gaggatggtgaaggtaatgacagtgacatctcagtggactctggctccacctctgggcca
aattttaactacattctgaacatgcctctgtggtgtctgaccaaggagaaggttgaggaa
ctcctcaagcagaaagacctgaagaaagcagagctgaatgaactccagaacaaaaatgca
gaagatctgtggagggaagatctgtctgttttcattgaggagctggaccgtatagagggg
caggagagggagagtgtgaactctgggaaggccacgaagctggtgaaagggaaggtgggc
aaacctaaagtgaagaagatgcacctggaagaaactctgccctctccctttggtcgcagg
atagagccacaggtcacacaggctatgaaggctgatgcctccaagaaactcaccaaaaaa
aagaagagtgaggtagatccagccttcaagttggagtttgatgaggacagcgtgctgggc
tccaatggaggagagaattccctcatttctccatccggccttcccatcccaggagccaaa
cccaaagctccgcgggtcaagcgagagaagaaagaacctggtgctccgaaacaaaggaag
ccatcaggtgctaaaggtccagctaagaaagttaaaaaaaggaatccattgtcagatgat
gaatgtaatgatcgttccgaaaatgagctggatgaaagtgaacctgttattcccagggac
accacatccaggagagcctcaggtgctccgaaacaaaggaagccatcaggtgctaaaggt
ccagctaagaaagttaaaaaaaggaatccatggtcagatgatgaatgtgatgatgatcgt
tccgaaaatgagctggatgaaagtgaacctgttattcccagggacaccacatccaggaga
gcctcagctgtgaaggccaagtacacatttgacttctctgaggaagaggagggtggtgac
gaggaacaggagaatgatggttcagcatcaccagttctctcctataaaaacacagagcgg
caaaatgatgatgaagaagatgatggagacatttttcctccaaaaacaacatttactttg
cctacttccccagcgaagaaaagggacccagtgcctgtattgtcatctaaaacggagtat
gctgacaagagcagtgatgacgatgggaagtcagacagtgatgatgacaggggtccagtg
ttctcatcaatttccaacagttctgtttttgagaaacctccacctaaaaaagttaagaaa
cctgcagaaatggcacctaaacagaagaaagttccagtaaaagccaagaagcctgataca
tccgtctgggactctgactcagacacgggcactaaaaaagcatcagcagcaccaaaaggg
ggtgggaaaggccgaggcaggaaaaggaagcagtcgagctcagaggaggaggtttataac
cctgtgaagaagactggaaagactgccacaagcaggaaaccaaagaaggcagtgtctgac
gatgaagaagatgatgacgcaagcatgaacagcttcagccgtctggactcaggcagagat
cgatccggtcgagccaagaaagaagtcaaatattttgcagaatctgataatgatgatgac
gatgacgatatgtttgactag
DBGET
integrated database retrieval system
