Pimephales promelas (fathead minnow): 120485761
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Entry
120485761 CDS
T08155
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120485761
04121 Ubiquitin system [BR:
pprm04121
]
120485761
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120485761
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120485761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
RIG-I_C-RD
Motif
Other DBs
NCBI-GeneID:
120485761
NCBI-ProteinID:
XP_039537476
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MAANLVSKPNTVSPIWAHFGFEAGEKGQPVNLDEAVCRICRKKISVSRGNTTNLRSHLRI
NHPAAFAGLGCSTPTTSGQQRQLGVSEAFARGAKYQRGSDQWRVLTDSVTRYLVEEMVPF
RTVEKSAFKAMLQAFDKQYVLPDRKYFSQTAIPEKYLSVKDGIIQDLKDVDNFSVTTDMW
SSVNMMPYMSLTIHYLNANWDLQSKCLETVFTPESHTGENLAEALRSSFHEWSLDERKLV
CITTDNGANIVAAVRKLGWTWLNCFGHNLHLAVTNALKAEKDRTARAMGVCRTLVTTFSQ
SWQKKKKLQKEQVELNLPQHCLVLDCPTRWGTKQKMVARALEQLPAIRRVLMDDRRSQHL
IPTWQDIEVLESVNAALKKVADFTDALSSEKTVTASSVKPVLQLLTEDSLLPTDEDTELT
RNLKRKMAGVLKDKYSAPATQQLLAKASFIDPRYKDINPGDDVKDALLEEMMAMPEERRD
IGDGEGAMSTAASGEEGGGSAPSSSPPPKKKKNLADLLGKRKAQSSNPVPKRIRADTEVA
RYMQEDALDLHSDPLAWWRDNQARFPLLSKVARKYMTICATSTPSERVFSAAGNIVTPLR
SSLKPDKVNMLVFLSRNLKTEK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaatctggtgtctaagccaaatactgtgtcgcctatttgggcacattttggc
tttgaagcaggtgaaaagggccagccggtgaatttagacgaggcagtatgccgtatttgt
cgcaaaaaaatatccgtctcgcgaggaaatactactaatttaagatcccatctgagaatt
aaccaccctgccgcgtttgctggacttgggtgcagcacacctacaacctcaggccagcaa
cgacagttgggagtctccgaggccttcgcgagaggtgccaaataccaaagaggcagcgat
cagtggcgagtacttactgacagcgttacacgttatttggttgaagaaatggtaccattt
cgtacggttgagaagtcagcgtttaaagccatgctacaggcatttgataagcaatatgta
cttcccgaccgaaaatacttttctcaaacagctatcccagaaaagtatctgtccgtgaag
gacggcataatacaggacttaaaagacgttgataatttctcagtgacaactgatatgtgg
tcgagcgtaaatatgatgccatatatgagcctgaccatacactatctcaacgctaactgg
gacctacaatcaaagtgcctagagaccgtgttcacgccagaaagccacacgggtgaaaac
ctggcggaagctctcaggtcttccttccatgagtggtccctggacgagaggaaactggtc
tgtattaccacagacaatggggcaaatattgtggctgcagtgcgcaaacttggctggaca
tggctaaattgctttggccataatctgcatttagccgtcaccaatgcactgaaggcagaa
aaggaccgcactgcccgagccatgggtgtgtgcaggacattggtgacgactttctcgcag
agctggcaaaagaagaaaaagctgcagaaagaacaagtcgagctcaatctgccccaacac
tgcttagttctggattgtcctaccaggtggggcactaagcagaaaatggttgcgcgcgct
ctcgagcaactcccagccattaggagggtgttgatggatgaccggcgcagccagcatttg
ataccgacgtggcaggacatcgaagtccttgaatccgttaatgcagcgctgaagaaggtc
gcagattttacagatgcgctgtcttccgagaagacagttacagcgtcctctgttaaacca
gtcctacagttattaaccgaggatagtttgctcccaactgatgaagacacggaattgacg
cgcaacctgaaaagaaaaatggctggggtcttgaaagacaaatatagtgcgcctgcaaca
cagcaactattggcaaaggcctcattcattgacccaagatacaaggacatcaaccccgga
gatgacgttaaagatgcgctcttggaggagatgatggcaatgccagaagagcggcgcgat
atcggggatggagaaggtgccatgagtaccgctgcgtctggagaggaaggaggaggaagt
gcgccatcatcttcgcctcctccaaaaaaaaaaaagaatcttgcggacctgcttggaaag
agaaaagcacaatcctccaatccggtcccaaaaagaatccgtgcagataccgaagtcgca
aggtatatgcaggaggacgccctcgatctgcactctgatccgcttgcctggtggcgggat
aatcaggctcgatttcctcttctatcgaaagttgccagaaaatatatgactatttgcgca
acgagcactccttcggagcgtgtattcagtgcggctggcaacattgttactccgttaaga
tcctcgctgaaaccagacaaggttaacatgttggttttcctgtcacgaaacctgaagacc
gaaaaataa
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