Pimephales promelas (fathead minnow): 120485853
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Entry
120485853 CDS
T08155
Symbol
ppfibp2a
Name
(RefSeq) liprin-beta-2 isoform X1
KO
K27096
liprin-beta
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120485853 (ppfibp2a)
Membrane trafficking [BR:
pprm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120485853 (ppfibp2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
CEP63
DUF16
FxsA
Tropomyosin
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
120485853
NCBI-ProteinID:
XP_039537561
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MEWDVDFCKHFAWLKKVNVQGPGNGESYQERLSRLEGDKESLVLQVSVLTHQVEAQGEKI
RDLENSLGEYQRKLSCTEQMLQQELLGRSSLESQKWGLMKEVSYLKLKLGNMEDKHINIA
ERQHKAESVVNLISELQEQMCRIRQEISSKIPEKPVEMVPEECCSSDQVQAFLTEPKPVN
LLQELKMLKHRVDELEQEKMQYEQKLKVTQAEIMSLQQLLSCKNSEIENLQAQLLSSTPG
SVDSADREEIYRRRLNTKHQELQRLKTGMESLITANNEKDRRIEELSLLLSQFREMNEII
TLVQGPGDKSVQNSSKDEKQNGTVKMKPLTHTAHTELTFSSSSSLLLSSFSPQKDANSRS
ISMEDFKDSSAQKAVDGTLVVPVLSEEIRPADKIHQTLPAILSHPENRDSETSDTSDQRT
PENKNEDINLRISEKMKDTTTSDLSSVCCRADSGQQSPVLQENIKNTSIRKLWGKMKRTG
VLSDDLEPTQFRRGGFRATAGPRLTRTPDSGHSSRSHIPFSKWSTEQVCGWLEDCGLGQY
VSLARQWVDSGQTLLSATPQELEKEICIKHPLHRKKLQLAIRAFSNKTMEKSSELDHIWV
TRWLDDIGLPQYKDQFYESKVDGRMLQYLTVNDLLFLKVTSQLHHLSIKCAIHVLHVNKF
NPNCLRRRPGDENKTSPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLIILEPRF
YSETLAMLLNIPPQKTLLRRHLTTNFSTLVGLQAQQEKQEFANASGHTPLNTTAKVRPKK
LGFTHFRQLRKLRMDESADYICPMETGTPPVLSGTPKRPYASFRGISPILARDSDRLEQV
GSKS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggaatgggacgttgatttttgcaagcattttgcttggctgaaaaaggtcaacgtgcaa
ggcccaggcaacggtgagagctaccaggagcgtctgtctcgtctagaaggggataaagag
tctcttgttttacaggtgagtgttttgacacatcaggtggaggctcagggagagaagatc
agagacctagagaattctcttggggaatatcagcgcaaactcagctgcactgagcagatg
cttcaacaggaacttctgggcaggagttctctagagtcacagaagtgggggttgatgaag
gaagtgtcctatctaaaactaaaactggggaacatggaggacaaacacatcaacattgct
gagagacaacataaagctgagagcgtagtgaatctgattagcgagcttcaggagcagatg
tgtaggattcggcaagagatctctagtaagatcccagagaagccagtggagatggtccca
gaggaatgttgtagcagtgaccaagtgcaagcctttctgactgagccaaagccagtgaac
ttgctccaggagctcaagatgctcaaacatcgagttgatgagctggaacaagagaagatg
cagtatgagcagaaactcaaggtgacacaggcagagatcatgagtttacagcagctgtta
agctgtaagaactctgaaatagagaatttacaggctcagctgctctccagtactccaggg
tctgtggacagtgcagatagagaggagatatacagaagaagactcaataccaaacatcag
gagctacaaaggttaaagacaggaatggagtcacttattactgccaataatgaaaaggat
cgtcgaatagaagagctctctctcctcctcagccagtttagagagatgaatgaaatcatt
actttagttcaaggccctggagacaaatcagtacagaacagcagcaaagatgaaaagcag
aatgggactgtaaagatgaagcctttaacacatacagctcacactgagttgaccttcagt
agctcatcttctctactgctgtcttcattttcacctcagaaagacgcaaactccaggtcc
atcagtatggaggactttaaagacagctcagcacaaaaggctgtggatgggacactggta
gtgcccgttttatcagaggagattcgaccagcagataaaatacatcagacacttccagca
attttgagtcacccagagaatagagacagtgagacgagtgacacatccgaccagaggact
ccagaaaacaaaaatgaagacatcaaccttagaatttcagagaaaatgaaggacacaacc
acatctgatctttcttcagtgtgttgtagagccgactctggccagcagtctcctgtgtta
caggaaaacataaaaaatactagcattcgcaaactttggggaaagatgaagaggacaggt
gttctgtcagatgacttggagcccactcagttcaggagaggaggcttcagggctacagct
gggccacggctaacacggacacctgactctggacactcatctcgttcccacatacccttc
tctaagtggtcgacagagcaggtgtgtggttggctggaagactgtggtttgggtcagtat
gtcagtttggcccgtcagtgggttgatagtggacaaacactcctctctgccaccccacag
gagcttgaaaaggagatttgtattaaacatcctttgcacagaaagaagctgcaactcgct
ataagagcttttagtaacaagacaatggagaaatcgtcagaactggatcacatctgggtt
acacgttggcttgatgacattggtttaccacagtacaaagaccagttctacgaaagcaag
gtagatgggcgcatgctacagtatctcacagtgaatgatctcttgttcttgaaagtcact
agtcaactccaccatctgagcattaaatgtgccatccatgtcctccacgtcaacaagttt
aacccaaactgcttgagacgcaggccaggggatgagaataagacatcaccctctgaggtg
gtgcagtggtctaaccatcgagtgatggagtggttgaggtcagtggatttggctgaatat
gctccaaacctaagaggcagcggcgttcatggaggcctaattatcctagagcctcgcttt
tactctgagaccttggccatgctgcttaacatccctcctcagaagaccctcctcagacgc
cacctaaccaccaacttcagcacactggttgggctccaggcccaacaggagaagcaagag
tttgccaatgccagtgggcacacacccctaaacaccactgccaaagtcaggccaaaaaaa
cttggttttactcacttcagacaactgagaaagctcaggatggatgaatctgcagattac
atctgccccatggaaacagggaccccaccagtccttagtgggacaccaaagcggccttac
gcaagtttcaggggcatcagccctatcctggccagagactcagacagacttgagcaagtt
gggtcaaagagctga
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