Pimephales promelas (fathead minnow): 120485891
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Entry
120485891 CDS
T08155
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120485891
04121 Ubiquitin system [BR:
pprm04121
]
120485891
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120485891
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120485891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
120485891
NCBI-ProteinID:
XP_039537620
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MPSRKHITKVVLPDLYDACQAKVEAEIHKGMFYATTTDMWSNRTTHPYMSLTIHFINRDW
NLCSRCLQTSYFPEDHTGEMLAKGLRESLQLWGLQEDRLVCVTTDNATNNILALQLNEMT
RLQCFGHRLQLAIERSVKLREVEQAVGVCKKIVDAFSNSWKRRRELAKAQADQNPPLPPH
QLITETPTRWGSMQAMVERVIEQEKALSQVLRADKKTRHLVPTWQDMDVLESMNKALSPL
KEFTDALSGELYPSVSYLKPVLHLFKNQILKHQDGDTELTTTIKEGILKYLNEKYDDQTT
QDLLDMASLVDPRFKTTYIKQERVDYIKTRAAAELQKLVAEQTEAVPLSAPSVTAAGQDE
QEEVPAKKKKKSLSSYFKTSAKPSQVAPHSTSSRESIEKELSLYLLMEAGPDTEPLEWWK
RNEVHFPLVAKLARKYLCIPATSSPSERAFSASGNIVSCQRSALKPARVDQLVFLTLNL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccgaaaacacattactaaagttgtgttacctgatttatatgatgcatgtcag
gccaaagtggaggcagagattcacaaggggatgttctacgctacaactacagatatgtgg
tcgaaccgaacgacacatccatatatgagcctgacgatacactttatcaaccgagattgg
aacctctgcagccgctgtttacagacaagttatttcccggaagaccacactggagaaatg
ctagccaaaggactcagagaatctcttcaattgtggggactgcaagaggatcgccttgtc
tgtgtcaccacagacaatgccaccaacaacatccttgcccttcagctgaatgaaatgaca
cgcctacagtgttttggccaccgtcttcaactagctattgagaggagtgtgaaactaagg
gaggtggaacaagcagtcggcgtctgcaagaagattgtggatgccttctccaattcatgg
aaaagaagacgggagctggccaaggctcaagcagatcaaaatccacccttgccgcctcat
cagctaatcacagaaacccctacgaggtggggctctatgcaagcaatggttgaaagggtg
atcgagcaggagaaagctctctcacaagttctccgtgccgacaaaaagacacgtcacctg
gtcccaacttggcaggatatggacgttctggaatccatgaacaaggcactgagtcctctc
aaggagtttacagatgccttgtctggggagctttacccaagtgtttcctacttgaaaccc
gtcctccatctgttcaagaaccagatactcaagcatcaggatggtgacactgagctcacc
acgactataaaagagggcatactaaaatacttaaatgaaaagtatgatgaccagacaacc
caggacctgcttgacatggcttctcttgttgaccctcgattcaaaaccacgtacatcaaa
caagagagggtggattacatcaaaacaagagctgctgcagagctacagaagctggtggct
gaacaaacagaggcagtccctctatcagctccatcagtcactgccgcaggtcaggatgag
caagaggaggttcctgctaagaagaaaaagaagagtttgagcagctattttaaaacatca
gcaaagccaagccaagtggctccacattcaacttcaagcagagagtcaattgaaaaggag
ctaagcctctatctcctaatggaagcaggtccagacacagaaccactggaatggtggaag
agaaatgaggtacattttcccctagtggccaagcttgcgaggaaatatttatgtatccct
gccacaagttcaccatcagagcgggctttcagtgcaagtgggaacattgtgtcatgccag
aggtcagcactgaaaccagcaagagttgaccagcttgtattcctcacactcaacctgtag
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