Pimephales promelas (fathead minnow): 120485948
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Entry
120485948 CDS
T08155
Symbol
si:ch211-220f16.2
Name
(RefSeq) LOW QUALITY PROTEIN: golgin subfamily A member 4
KO
K20478
golgin subfamily B member 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120485948 (si:ch211-220f16.2)
Membrane trafficking [BR:
pprm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
120485948 (si:ch211-220f16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAM76
Motif
Other DBs
NCBI-GeneID:
120485948
NCBI-ProteinID:
XP_039537693
LinkDB
All DBs
Position
Unknown
AA seq
1902 aa
AA seq
DB search
MLKWFSADESGSAHGAPGSPSVDTGGTDIRFSEITEQLTQMQELVAHLKELIREKDAALG
NKDEQVKELTEQMQLLRSERENFQSKLEAERHISRARVRDLMEKHEAELLKAANKHEAEM
SEKEQALRRQLETLQRSITLPADASANQSTCITDQRVTELQAKVKLKDSEVSKAEAKFLK
MKAWSKSRIRQLEQELKKVQSGVSPDMSPDITSLHGRITELQEEREEMLSKLELYEDMKA
KNDELQKQLMEYKEQQRKMQADLEQVTKRAASQGSETCSMDDVQVMEWQEMVTMVTEAER
VRDQGHEKNAMSFRISHIEEEREELIEDDWLFPGCSDPALANRQQEVEEELAQAHGLKSR
KPKYFTPRNLQEDLEFHNRQDPIGPSDCDVNGENMGGWWPQHSAADTDGLRSVVEELELE
RNQLQEQILVLEKQCGDLEDRLQLQARIELLQNESERLQAQVVSLRSQQIKDTEKHQLLI
TSLNKQLQGLSCTQECLESSLMEKEHTLARTSEKLECIESLREALETKEKQQQDTADKLL
QTEHNLAEVKKTCSTFEKENSEMKATVAELTLKXGVLKDKMQKQEATIESLQSDLAQTND
DLDRLNTAHMEERAQLVHDLQSCEREIDRLQDVITDKDKEILALSSITAEYSEQIHELKQ
EMKLKEDVLNKVERDVQIFRDPQLSDQQFFNVLIPQLIEQLKRTESDLKVAKKEGESKSD
EIKDFTKQTEDDKKTIQDLRMEIQKLSMNVKDHLLDREHVHEKEFVKEERNKLLDEVSKH
KSELLMFSRKFEEQVECQEQLKQDVQDKSKIICLLEQKLKAVQEETVAERDRFNKELKIR
DLAKETLEKDLSDKIESFESVKDNNKKLQESIEQNFGELTRQKQLLDNAKEEIRAVQDQN
SNLLLQVKSLTNDNCQLKMEIESIGQSLSDVSDEKIRLVSKISEVELQLFERVKTTEDLQ
MEKEELALRGTELNKELEQNKQSVAEILLEKDSVVRLNETLTRQTQHLQEMFEEKQKEML
TLTQVVSEMNSKVTLTLKENEELSSKIISLDEQNKCLQKQMNEQMKSLTETKKERETLQN
KVLIFESQDVENRKLIEGLLKQKEGLLLQVEEYKVILQKQQSGAETLQEKSSECAALSQC
LRETKEEVDHLRRELESSTSQVIQYNHIVLEKEKILTDQSAQIEAYRHQLEDLQDSISIL
QQQANEHKSGLTEKDILLQTESNTGVLLQKELSRERELVFSLQQEISTLKMDLEVKESTL
RETNLERHNHSEELDKRNESLLSLTSQLGIMNTNIVKLESDHANVKNTLEMHLAENGRLK
EELRQKQIEVVEYQDSFQAMNDQNIVIKSELKNSMGEMFRQREMITSLQNELASKRVELT
SLTEQFKSEQSHLEALQLTLQEKENVFRMQEMYVNQMQVKLLESEDQITQKLTVISELHE
EIQNLQKALQNKDVLLLNKDKEFSQVKTTLLAQSEASEARLKLEMGAIAKFQGELQNLQE
KNNHLISIINEKDSLLMQEKEKYLSLHSSSSELNFKIEQLTSEITLLREKQAEKELITFA
AQSQMQKLDELYKKLQEEYNFTKQELIKVVNEKSLKEEEVCKLVLEKEEICRSSSYQIQR
IQDQVQHQWQSSTMNEVEEDTPMEREKLHILESMTLQGKDVSPEQLHSNLHHYQLEIQQR
ESALQQLNIKLQRAIEEKEEVSTQLNTVSKMLRDTQQTVSELQNRCCWLERQFQNQYSPT
QGAVYAEVPPGAPQEPMRANFNPDGSDSGDLRMRLVEAEFHLSQLNSRLEEERSRREAAE
EAMRLTEQRVVSMESKQSWNAQRDFSIQLETEEQQYLILRPSQHTVLHKMRSGVHLCQRW
LKGRSVFCCSKLLTSRGKSRYIFIGYLLMLHVLVFVCLSWSL
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtggttttcggcagatgagtccggctctgctcatggagctcctggctcccca
tcggtggacaccggaggcactgatataagattttctgaaatcactgagcagttgacgcaa
atgcaagaacttgtggctcatctaaaggagttaatcagggagaaggatgcagcactcggc
aataaagatgaacaagtcaaggagctgacagaacaaatgcaactcttgcggagcgagaga
gaaaactttcagtcaaagctggaggcagagcgccacatttctcgtgctcgggtcagagat
ctaatggagaaacatgaggctgagctcctcaaggctgctaataaacacgaggctgagatg
tcagagaaggagcaggccttgcgcagacagcttgagactcttcagcgctctataacacta
cctgcagacgcctcagcaaaccaatctacctgcatcacagatcagagagtcacagagctg
caagctaaagtgaaactgaaagattccgaggtcagtaaagcagaggcaaagttcttaaag
atgaaagcatggtccaagtctcggattaggcagctcgagcaggaactcaaaaaagttcag
tctggagtatctcctgatatgtcccctgacatcacgtccttacatggtcgcattactgaa
ttacaagaggagagagaggaaatgctcagcaaactggagctgtatgaagatatgaaggca
aaaaatgatgaactgcagaaacagcttatggaatataaggaacaacagaggaagatgcag
gccgaccttgaacaggtgaccaagagggcagcatcacaggggagtgagacctgcagcatg
gatgatgtacaggtgatggagtggcaagaaatggttaccatggtgacggaggcagagagg
gttcgagatcagggtcacgagaagaatgccatgtccttcagaataagccacatcgaggag
gagagagaggaactgattgaggatgactggttgtttcctggctgctccgatccagcatta
gccaatcggcaacaggaagtggaggaggagttggcccaggcccatggactgaaaagcagg
aagcctaaatatttcaccccacgcaacctgcaggaagacttggaatttcataataggcaa
gacccgataggtcccagtgattgcgatgtgaatggagagaatatgggtggatggtggcca
cagcacagtgctgcagatacagatggtttgaggtctgttgtcgaggagcttgaactggag
agaaaccaactacaggagcagattttggtccttgagaaacaatgtggagatctagaggac
cgtctgcaacttcaggctcgcattgaattactacagaatgagtctgagcggctgcaggca
caggtcgtcagtcttcgcagtcagcagattaaagacacagaaaagcatcagctgctcatc
accagtctgaacaaacaactccaaggactgagctgcacacaggagtgtctggagtcctcg
ctcatggaaaaggagcacacgcttgccagaacctcagagaaactggaatgtattgagagt
ctgagggaggctttagagacaaaagaaaaacaacagcaagacactgctgacaaacttctt
caaactgaacacaatctggctgaagttaaaaagacatgcagcacctttgagaaggaaaac
tcagagatgaaagcaactgttgcagagctgacactcaaanttggtgtactgaaagacaag
atgcagaaacaagaggcaactatagaatcattacagagtgatctggctcaaacaaacgat
gatcttgacagactgaacacagcacatatggaagaaagagcacagctggttcatgacttg
cagagctgtgagcgggaaattgatagacttcaagatgtcatcactgacaaggacaaagaa
attctggctttatcatccatcacagcagaatattcagagcaaatccatgaattaaaacag
gaaatgaagctcaaagaggatgtgctgaataaagtcgaacgggatgttcaaatcttcaga
gacccacagctttctgaccaacagttttttaacgtgttaatacctcagctgattgaacaa
ttaaagagaactgaaagtgatctaaaggtagcgaaaaaagaaggtgagtctaagagtgat
gaaattaaagacttcacaaagcaaactgaggacgataagaaaacaatccaggatctccgc
atggaaatacagaagttgagtatgaatgtcaaagatcacctattggatagagaacatgtg
catgaaaaagaatttgtcaaagaggaacgtaataaattgcttgatgaagtcagcaaacat
aaaagtgagcttttgatgttctctagaaagtttgaggagcaggttgaatgtcaagagcag
cttaagcaagatgtccaagacaagtcaaagataatatgcctattggagcagaaactgaag
gctgttcaagaggagaccgtagcagagagggatagatttaacaaagaactcaagattcga
gatttagcgaaagaaacccttgagaaagatttgtctgataaaattgagagttttgaatct
gtgaaagataacaacaagaaacttcaagaatcaattgagcagaattttggggagcttaca
agacaaaagcagcttctggataatgccaaggaggaaatacgagctgtgcaagatcagaat
tccaacttgcttttacaagtcaaaagcctcactaatgacaattgtcaattaaaaatggaa
attgagtccattggccagtctctttctgatgtttcagatgaaaagataaggttggtaagc
aaaatatctgaagttgaactgcagctgtttgaaagggttaaaacaacagaagacttgcag
atggaaaaggaagagctagctctcagaggaactgaattgaacaaagaacttgaacaaaac
aagcaatcagtggctgagattttgttagaaaaagattctgttgtcagactcaatgagaca
ttgactagacaaactcaacatttacaagaaatgttcgaagagaaacaaaaggaaatgctt
acactgacgcaggttgtgtctgaaatgaacagcaaggtcacattaactctcaaagaaaat
gaagaactttcttcgaaaatcattagtcttgacgaacagaacaagtgccttcagaaacaa
atgaatgaacagatgaagtcactcacagaaacaaaaaaggagagagagacattacaaaac
aaagtcttgatttttgaatcgcaagatgtggaaaaccgcaaacttatagaaggtttactt
aagcaaaaggaaggtttgcttttgcaagtagaggaatacaaagttattctacagaaacag
cagtctggagctgagaccttacaggaaaagtcttcagaatgcgcagccctctcacaatgt
ctcagagagaccaaagaggaagtagatcatcttaggagagaacttgaatcctccacttct
caagtcattcaatacaaccatattgtccttgaaaaagaaaagatcttaacagatcaaagt
gcgcaaatagaagcttatcggcaccaactcgaggatttacaagatagtatatccatactt
caacaacaagcaaatgaacataaatcaggcttgacagagaaagacatcctgctgcagaca
gaatcaaatactggtgttttgctacaaaaggaacttagtcgtgaaagagaacttgttttt
agcctccagcaagagataagcactctgaaaatggacttggaagtgaaagaaagcacttta
agagaaacaaatcttgagcgtcacaatcactccgaggaattggataaaagaaacgagtca
ttgctttcactgactagtcagcttggtattatgaatacaaatattgtgaagcttgaatct
gatcatgcaaatgtaaaaaatactttagagatgcatttggcagaaaatggtagactaaaa
gaggagttgagacagaaacaaatagaggttgtagaatatcaggatagttttcaggcaatg
aatgaccaaaatattgtaattaaatctgaactgaagaattcaatgggagaaatgtttaga
caacgagagatgatcacttctctacaaaatgaattggctagcaaaagagtggaactgacc
tctttgactgaacagttcaaatcggagcaatctcatcttgaagctttacaactcactctg
caggaaaaagaaaacgttttcagaatgcaggagatgtatgtaaatcagatgcaggtcaaa
ctgttggaaagtgaggaccaaatcactcagaaattaacagtgatctctgagctacatgaa
gagattcagaatttgcagaaagctttgcaaaacaaagatgttttgctgttaaataaagat
aaagagttttctcaggttaagactacgttattggcacaatcagaagcatctgaagccaga
ctgaaattagaaatgggtgcaattgctaaatttcaaggggaattacagaacttacaagag
aagaataaccatctcatcagcatcattaatgaaaaggattctttattgatgcaggaaaaa
gagaagtatctgagcttgcacagtagttcgtcagaactgaactttaaaatagagcaatta
acctcagagatcacactactcagagaaaaacaagctgagaaggaactaatcacatttgct
gctcagtcgcaaatgcagaaactggacgaactgtacaagaaacttcaagaggaatataat
ttcaccaaacaggagttgattaaagttgtcaatgaaaaatcattaaaggaagaagaggtc
tgtaaattggtcctggaaaaggaagagatctgcagaagttccagttatcagattcagaga
attcaggaccaggtacaacaccaatggcaatccagcaccatgaatgaagtggaggaagat
acgccaatggagagagagaagctccacatcctggagtccatgactttgcagggtaaagat
gtgtctccagaacagttgcatagcaatctgcatcactatcagctagagatccagcaaaga
gaatctgccctccaacaactcaacatcaagttgcaacgggcaattgaggaaaaggaagag
gtgtcgacccaattgaacactgtttccaagatgctcagagacacacagcagactgttagt
gagctccagaatcgctgctgttggctggagagacaatttcaaaaccagtattcacccaca
cagggtgcagtctatgcagaagttccaccaggagcccctcaggaaccaatgcgtgcaaat
tttaacccagatggatcagacagcggagacctcaggatgaggctagttgaggcagagttt
catctgtctcagttaaactctagattggaagaggagagatcaaggagagaggccgcagag
gaagccatgcggttgaccgaacagagagttgtgagcatggagtcaaaacaatcatggaat
gctcaaagggactttagtattcagctggaaacagaggagcaacagtatcttattcttcgg
ccaagccagcacacggtcttgcacaagatgaggagtggggttcacctgtgccagcggtgg
ctcaaaggaaggagtgtattttgctgttccaaactactgacatccaggggaaagtcacgc
tacatattcatcggctaccttcttatgcttcatgtgctggttttcgtgtgcctcagttgg
tctctttag
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integrated database retrieval system
