KEGG   Pimephales promelas (fathead minnow): 120485981
Entry
120485981         CDS       T08155                                 
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41
  KO
K23610  WD repeat-containing protein 41
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    120485981 (wdr41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pprm04131]
    120485981 (wdr41)
Membrane trafficking [BR:pprm04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    120485981 (wdr41)
SSDB
Motif
Pfam: Beta-prop_WDR41 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EIPR1 DSE1_N EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_IP5PC_F CFAP251_N WD40_Gbeta Beta-prop_RIG_2nd ASA1 PAC11 Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_KIB1-4 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_Nup120_160 WD_LRWD1
Other DBs
NCBI-GeneID: 120485981
NCBI-ProteinID: XP_039537749
LinkDB
Position
Unknown
AA seq 450 aa
MLRWILGGREAQGTVEKSAALFIGEEQPKNCFTEMQVLKGHFDIVRFLVQIDDLRFASAG
DDGQVLIWNIETGDCLLELRGHTQQITAMTSYTIIRGGNTHTALITASSDRTLSLWDTDS
GNRVQNISDLQSSVKCLLVLDRLDVWLSGGNELCVWNRDFELQCKTVHHSDEGISAMLEL
PKNFIAAAMDKEIVIFKLNLSGSDIVVMAMRHLADHRDTIRSLININDGLFASGSHIGEL
IIWDSVDWTIQAYEHIVWEEPAVDNQSEVRLTQQKPIEKSIQHMSSDGEFIVAAVGSGLY
VYDVPRKCVVAYRKIAHDSCVLHTMLQKDGQLMSCSEDGSVRMWELQDLPLPAEPASSGF
FGMFGTFGRSSKQSCPPVTKLPEVPGLRSLQLNGDLIGHSGAVQMFLSFKEKGLVTCSTD
HLLIVWKDGELQSQLRSLAVFQKLEENQEL
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgctgcgatggattctggggggtcgagaggcgcaggggacagtggagaagagcgcggcg
ctgttcattggggaggaacagcccaaaaactgtttcacggagatgcaggtgctgaaagga
cactttgacattgttcgatttctggtgcagattgatgacttaaggtttgcatctgctgga
gacgatggtcaggtgctgatttggaatattgagactggtgattgtttgttggagttgcgc
ggccatacgcagcagatcactgcaatgacatcatacaccatcatcagaggcggaaacaca
cacacagctctcattacagcatcatcagaccgaacactcagtttatgggatacagattca
ggaaaccgagtgcagaatatatctgatctccagtcctctgtgaagtgtttgctggtgttg
gatcgcttggacgtgtggctctcgggtggaaatgaactgtgtgtttggaacagagacttt
gagctgcagtgtaaaacagttcatcacagtgatgaaggaatctcagccatgctggagcta
cccaagaacttcattgcagctgccatggataaagagattgtgatttttaagttgaacctg
tcgggctcagacattgtggttatggccatgcgtcatctcgctgaccatcgtgacaccatc
cgttctctcatcaacatcaacgacggcttgtttgcgagtggctctcatatcggtgagctc
atcatctgggattcagtggattggacgatccaggcttatgagcacattgtgtgggaggag
ccagcagtagacaaccaatcagaggtcagactgactcaacagaaaccgatcgagaagtcc
attcaacacatgagctcagatggagagtttatagtggcagctgtcggcagtggtctgtat
gtttatgatgtgccgagaaagtgcgtggtggcgtataggaagatcgcccatgattcttgt
gtcttgcacaccatgctgcaaaaggacgggcagttgatgtcgtgctctgaggacggcagt
gtgaggatgtgggagttacaggacctcccccttcctgctgaacccgcctcctcaggtttt
tttggcatgtttggcacttttggcaggtccagtaagcagtcatgccctcctgtcacgaaa
ctcccagaagtccctggtctgcgctcgctgcaactgaacggtgatctgattggtcattct
ggagctgtgcagatgttcctgagttttaaggagaagggtctggtcacctgctccacggat
cacctgctcatcgtgtggaaagatggagagctgcagtctcaactccgcagtctcgccgtc
ttccagaaactggaggaaaatcaggaactgtga

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