Pimephales promelas (fathead minnow): 120486052
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Entry
120486052 CDS
T08155
Symbol
tulp4b
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120486052 (tulp4b)
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
Other domain-containing proteins
Tubby family proteins
120486052 (tulp4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
120486052
NCBI-ProteinID:
XP_039537830
LinkDB
All DBs
Position
Unknown
AA seq
1876 aa
AA seq
DB search
MSRDYEEPCQSVGMLAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLA
TGNARGVVGVTFTSSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIF
VWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLE
SQITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVSMSWNCPNFLVEDS
TESDTDSDDSTPAQVQNLKPLLTVSFISGDISLMNNYDDLSPNIIRSGLKDVEVQWCSQG
DLLAVAGMERHGLPADSACASLMRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSR
LFLACGPALYVVRVEHRVASLQLLCQQGIASALKEERDVGKLNMPSLLCSYVTTAFIPTI
KPPIPDPNNIRDFVSYPTAGNERLHCTMKRAEENPEAGGPCYTLYLEHLGGLVPILKGRR
ISKLRPEFVIMDPKMDGKADEVCVNGMISYMTDSCNCSDSSDIELSDEWVGRKSPKLSRG
NRSPKLPRYSKHIRINMESRKSPKLAQTSQEMSRSPRLPKKPPVRSPSLSRREFSVDGFS
EHNYLAQVTSNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISLD
FMSLPVFNPNVFSEDEDDLPVMGPSGVSADNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQ
SLLANQNIQLDVLTNPTATAAAAAAAATAAAANATVSEHSQDTVTAQYTVPTRYSNPGQV
IFSGVEMSNILSGTLPPPPNHLPQQPHQQRQQQQQQQDHQQSKHQQQLQPQQHHLKLQHQ
SQQLHQQSLQQQHMQNQQQLQTQQHQQQLQQQHQQQLQQQHQQHLQQQHQQQLQQQLQQQ
LQQQHQQLQQQHQQQLQQHQQQLHQQQMQQQQLQQQQQHIQQQVQQHQQQIHQQHQQQIH
QQHQQQFQQQQHQLQLQHEQMQQQQQQMQQQQQQIRQQILEMRQQQQQLQQQHQQIQLQH
QQMQRQHQQMQQQLKMQMTIQPPPSGYATLSLHQLQLMPPIPHPDHPPDRAEQVLPLKVS
SRPQSFIEADTLEIQMRKVNPPPPYPGTVVSTAAATPTTAPPGLLVSNENGTTLTTDQCL
TKDEFSLHPIGLQYPTPLGYERITTFDSSGNVEEVCRPRRRLLRNQNSYGIQGMGSSATL
KVTSSENKKVQLPYSSATLSRLSVPRYSIPSGDPPPYPDTSNQMNAIRSPAQRIDSSLIH
ATLRRDRRELTLKVSQMVDTVRTLPTKSKMNGSLTLSYQPRIPTALYTCTQCSSNSSSTS
VSVTGVGTNSSGIAGGTVVRQDFPPGKGTQHSTIIVHSKSSSPLASQSSYNLLSPIDHSR
DRTVYVNSAFTEDETLSQHCHLEKSVRHLTLGDVNLTVKRPPPYQWDSPAAEQLWIPQEQ
NVLPGPPGPPHKPPPFILSQPQHLDMTRLPFVLSTKPSPSPNSMTLPSAYQLSLSPFPTM
VGHGGPQLQTLQSPAQTCGPNDMVTSTTFSQPDPTLVLPPGYPANLTNLGCCTLPPMYPG
TSSCNNLQMHPMSLHPWSTYSTCPPMPDHSATLPSKTHQALEKPVLSPPPQPPPPPPPPP
PPPLPPPPPPVERLSTSEVVAESGDSFQDQSSLNESPQGAERFSKKGRKRLDSRAEEANM
SGVSEGKSKKESRTLSDFNSLISSPRLGSREKKKPKGQKEPLNKAKKLSRTSNEFQDSSE
SEPELFISGDELMNQSQSSKKGWKSKRNQRMANELEEIKCRKANEREDRSLGSQGFVYVM
ANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELDGRQVMQFGRIDGNAYILDFQYPFSA
VQAFAVALANVTQRLK
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggactatgaagagccttgtcagtctgtagggatgttggctgcggtggagcat
ggtccggtcctctgcagtgactccaacatcctctgcctctcatggaaagggcgagttccc
aagagtgagaaggagaagccggtgtgcaggagacgctactatgaggagggctggctggcc
actgggaacgccaggggtgttgtgggcgtcacgttcacgtctagtcactgtagaagggac
agaaataccccacaaagaatcaacttcaatttacggggtcataacagtgaggttgtcctt
gttaggtggaatgaaccgtttcagaagcttgcaacgtgtgacatggagggagggatattt
gtgtggatccagtatgaaggaagatggtctgtagagctggtgaatgacagaggtgctcag
gtgagtgacttcacctggtcacatgatggtacacaggccttaatcgcctacagggatggt
tttgtcctggtgggatcagtcagtggtcagagacactggtcatctgagatcaatttggag
agccagatcacctgtggaatctggacacctgatgaccagcaggtgctttttggaacagca
gacgggcaagtcatagtgatggactgccacggccgtatgcttgcccatgttctgctgcat
gagtcagatggcatagtcagcatgtcctggaactgcccgaacttcctggtggaggacagc
actgagagtgatacagactctgatgactctactccagctcaagtgcaaaatctcaaacca
ctgctcacggtcagcttcatatcgggagacattagtctaatgaacaactatgatgacctt
tcacctaacatcatacgctcaggactgaaagatgtggaggtacagtggtgctctcagggt
gacctgctggcagtggccgggatggagagacacggtctacccgctgactcagcctgtgcc
tccttaatgaggaacgcccttgtcaagttttacaatgtccaaggggaacatatatacacc
ttagaaactccagcccaaaggcccatcaccactatttgctggggtcacagagactcgcgg
ctgtttctggcctgtggaccagccctgtatgtagtgcgtgtggagcaccgtgtggccagc
ctgcagcttctctgtcagcagggcattgccagcgctcttaaagaggagagagatgtggga
aaactcaacatgccttcactcctctgttcctacgtcaccactgcattcattccaacgatc
aagcccccaatccctgatccgaacaacattagagattttgtgagctatcccacagcaggg
aatgaacggctgcactgcactatgaaacgtgccgaggagaacccagaggcaggaggcccc
tgttacaccctctatctggaacacctgggaggtctggtgcccattctcaagggccgtcgc
attagtaaactgcgaccagagtttgtcattatggacccaaaaatggatggtaaagcagat
gaggtctgtgtaaatggcatgatctcctatatgactgacagctgtaactgctcagattca
agcgatattgagttgagtgatgagtgggttggacgaaagtcgccaaaactttccagagga
aacaggtctcctaagcttcctaggtactctaaacatataagaattaatatggaatcaaga
aagtctcccaaacttgcccagacatctcaagaaatgtctaggtctcctagattaccaaag
aagcctccagtacgatctccaagtctttctcgaagggaattttcagttgatggctttagt
gagcataattacttagctcaggtcacctctaacatctggggaacaaagtttaagattgtg
ggcctagcttcctttttgccagctaacttaggagcagttatttataaaactagtttgctg
cacctgcaacctcgtcagatgaccatctatttgcctgaggtgcgtaaaatttccttggac
ttcatgagtctccctgtctttaatcccaatgtgttcagtgaagatgaagatgatttacct
gtgatgggaccttctggagtgtcagccgacaatcctccttgcacagttaatatccccatt
gctccaattcacagccctgcgcaagccatgtcacctacacagagtataggccttgtccaa
tctctcctagccaatcagaatattcagcttgatgtcctcaccaatcccacagctaccgca
gcagcggctgctgcagcagcaacagcagcagcagccaatgcaactgtgtcagagcacagt
caggacaccgtgaccgcacagtacactgtgccgaccaggtactctaaccctggacaggtg
atattcagcggagtggaaatgagtaatatcctgagtggaactcttcctcctcctccaaat
catctaccacaacaaccccaccaacagcgtcagcaacaacagcaacaacaagaccatcaa
caatcaaagcatcaacagcagttacaaccacagcagcatcatctgaaattgcaacatcag
tcacaacagctgcatcaacagtcgctgcagcagcaacacatgcagaatcagcagcaatta
caaacacagcagcatcaacaacaacttcaacagcagcatcagcaacagctgcaacagcag
catcagcaacatctgcaacagcagcatcaacaacagctgcaacaacagctgcaacaacag
ctgcaacagcagcatcaacaactgcaacagcagcatcaacagcagttgcaacaacatcag
cagcaattgcatcagcagcaaatgcaacaacagcaactgcaacagcagcagcaacacatt
cagcagcaagtgcaacagcatcaacaacaaattcatcaacagcatcaacagcaaattcat
caacagcatcaacaacaattccaacagcagcagcaccagttgcagctgcagcatgagcaa
atgcagcagcagcagcaacagatgcaacaacagcagcagcaaattcgacagcaaattctg
gagatgaggcagcagcagcaacagcttcaacagcaacatcaacaaatacagctgcagcat
caacaaatgcagagacagcatcagcaaatgcaacagcaactcaaaatgcaaatgaccatc
cagcctccaccttcagggtatgctacgctgtccctccatcagttacagctgatgccgcca
attcctcatccagaccatccaccagatagagcagaacaagtgcttcctctgaaggtttcc
tcacgaccacagtcattcattgaagctgacactcttgagatccagatgcgcaaggtaaac
cctccaccaccttacccaggtacagtggtatctactgcagccgccacacccaccacagcg
cctccaggtcttcttgttagcaatgagaatggcactacgctgacgacagatcaatgctta
actaaggacgaattctctcttcatccaattgggcttcagtatccaactccattaggctat
gaaagaattaccacgtttgacagcagcggaaatgtcgaagaggtgtgccgcccaaggaga
cgcctgttaaggaaccaaaattcctatgggattcaaggaatgggcagctccgccacattg
aaagtaacttcgtcggagaacaagaaagtccagttgccatacagctcagctactctgagt
cgcctctccgtgcctagatattctataccaagcggagacccaccaccatatccagacaca
tccaaccagatgaacgctatcagaagtcctgcacagaggattgacagcagtttgattcat
gccactttgcgtcgagatcgaagggaactgaccctgaaggtttctcaaatggtggacaca
gtgaggactctaccgacaaaatccaaaatgaacggttcccttacgctctcctatcagcca
aggattcccacggctttgtatacgtgcactcagtgtagcagtaatagcagcagcactagt
gtaagcgtcaccggtgttggcaccaacagcagtggaattgctggaggaactgtggtgagg
caagacttcccacctgggaaagggacccagcacagcactataattgtgcactccaaaagt
tcatcgccattagcctcccagtcctcctataacctcctgagtcccattgaccacagtaga
gacagaactgtctatgtgaactctgcctttacggaagacgagacattaagtcagcattgc
catcttgaaaaatcagtacgtcatttaacactaggggatgtcaatttaacagtcaaacga
cctccgccttaccaatgggactctcctgcagcagaacaactctggatacctcaagagcaa
aatgtattgcctggacctccaggaccacctcataagccaccaccttttatacttagccaa
ccacagcacttagacatgacccggcttccttttgtcctttcaacaaagccttcccccagt
cccaattctatgaccctcccttcagcctatcagttatccctatcacccttcccaacaatg
gtagggcatggtggacctcaactacagactttgcagagtcctgcccaaacatgtggcccc
aatgacatggttacatctaccactttcagccaaccagacccaacattagtcctaccccca
ggttatcccgctaatttgaccaatctaggttgttgcactctgccacccatgtacccagga
actagctcctgcaacaaccttcagatgcatcctatgagcttgcatccttggagcacatat
agcacttgccctcccatgccagaccattccgccacactgcccagtaagacccatcaggcc
ctggagaagcctgttctctctccgcctccacaacctcctcctcccccaccacctcctcct
ccacctcctctccctccacctccgccacccgttgaacgcctgagcacctctgaggtggtc
gcagaatctggggatagctttcaagatcagtcctctctcaatgagagtcctcaaggagca
gagaggttcagcaaaaaggggcgtaagaggcttgacagtagggcggaagaggccaatatg
tccggagtctctgaagggaaatccaaaaaagaaagtcgcactctctctgacttcaattcc
ctgatctccagcccaagacttggcagcagggaaaagaagaagcctaaaggacagaaagag
cctttgaacaaggctaagaaactgagtaggacctcaaatgagttccaggacagctcagag
agtgagcctgagctcttcattagtggtgatgagttgatgaaccaaagccagagcagcaag
aaaggatggaagagcaaacgcaatcagcgtatggcaaatgaacttgaggaaatcaagtgc
cgcaaagctaatgagagagaggatcgtagtcttggcagccaaggctttgtttatgtcatg
gccaacaagcagccattgtggaatgaagctacccaggtttaccagcttgactttggagga
cgggtaacacaggagtcagccaaaaactttcagattgagcttgatggacgccaggtaatg
cagtttggcagaatcgatggcaatgcatacatcctggattttcagtatccattctcagcg
gtacaggcatttgctgtggccttggccaatgtcactcagagacttaaatag
DBGET
integrated database retrieval system
