Pimephales promelas (fathead minnow): 120486204
Help
Entry
120486204 CDS
T08155
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120486204 (stxbp5l)
Membrane trafficking [BR:
pprm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120486204 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
120486204 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_DCAF4
Beta-prop_VPS8
Synaptobrevin
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
120486204
NCBI-ProteinID:
XP_039538002
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MKKFRKVLDGLTTSSPVNPGGSPACGSAAGTPSAAPTPRELEIQETLMSEHFQICKTVRH
GFPYQPTALAFDPVQKILAIGTRSGGVRLLGRPGVDCHCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFESGTIVMWDLRVKRADFRI
YYDEAIHSVSWHHEGRQFMCSHSDGSLSMWNLRNTAKPFQVTFPHGKSQRDGRKESCKPI
LKVEYKTSRNSSEAFVIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVDFMVLCDTP
YLNEVQEPYAVVVLLEKDFVVVDLTQSNFPIFENPYPMDVHESPVTCTAYFADCPPDIIP
VLYSIGAKHKKTGYSHKEWPVSGGTWTIGSQTYPEIIVTGHADGSIKFWDATAITLQMLY
KLKTSKVFENPKSGDMGRSGELVEEDPYAVQMISWCPQSRIFCVVGISAHVILYRFSKYD
TNTTITSLEVRLQCEMEDVISPSDTENTPCYSDPSGLSPQPQPPSPRSNTPDSTRDSIPC
LKVKDRMIRMPPGYQAELVVQLLWIDGEPPQQITSLDLNSAYGLLAVGNCNGLAVVDYLQ
KTILLCMNTLELYGSADPFQRLTRSPRKNRQSTSDFCMRGLSNFYSDSKKRIRTSYQSLT
ELSDNQVSLDLERSKSPTSAPYSPSLHNDPRGTGEPVSNLRSCHYSPVFYLLDNVKGPGR
KLSLPTDLKTDLDHVNGHCTSPTSQPCPSGRARVPGGPEGPRLARRGPGRPPFRKAQSAA
CMEVSLPVSSLTEGHSSRRAMLQQLHGVSMYSHDEHHITTYSWSERESRENSFSRSRSSS
VSSIDRETKEAVTTLQFMESYGRKSDPLPTPCLWVGTSLGLVLIIPMSIPMDEQERQEDP
VTVVPTGTVLMLKGSILRFSFLDFGGALIHSPYEVWRDQQAPGDPDRPRKRKLVNFSPSS
SQEASGDCHLAVVCSEKQAKVFLMPTQACLYVHNITESSFLLRADVVSVCNSVCLACFCA
NGHIMTLSLPSLRPLLDINYLPLTDMRIARTFCFTNGGQALYLCSPTEIQRITYSQEMCD
NLQEMLGELFTPIETPEAPNRGFLKGFFGGNAQTFDREELFGEASAGKGSRSLAQHIPGQ
GGMEGMKAAAGGVVGDLARARIALDERGQRLGELEERTALMMSSAETFSKHAHELMLKCK
DKKWYQF
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttccggaaggttttggacgggttgaccacttcatcgcctgtgaatccaggc
ggatctcccgcgtgcggcagtgcggccgggacccccagtgcggcaccaacaccgcgcgaa
ctggagatccaggaaacgctgatgtccgagcacttccagatctgtaagacggtgcgtcat
ggatttccctatcagcccacagctctggcatttgacccggtgcagaagatccttgccatc
ggcactcgttccggaggagtacgtcttctaggaaggccaggagtggactgtcattgtcag
catgagagtggggcggccgttctccagctgcagtttctcatcaatgagggggcactggtc
acagcctgtgcggacgacacgctgcatctctggaatttacgacagcgacgtccggctatc
ctacactctctcaaattcaacagagagcggatcacgttttgtcatcttccgtttcaaagt
aaatggctttatgtggggacagagcgtggaaatacacacatagtgaacatcgaatccttc
gttttgtctggatatgtcatcatgtggaacaaggccatagaactatcaacgaagacacat
ccaggccctgttgttcatctaagtgacagtccaaaagatgagggaaagttgctgataggt
tttgagagcggtacaatagtaatgtgggacctgagggtcaaaagagctgacttcaggata
tactatgatgaggccattcactcagtaagctggcatcacgagggccggcagttcatgtgc
agtcattcggatggcagtctgagcatgtggaatttgagaaacacagccaaaccttttcaa
gtcaccttccctcatggcaagtctcagagagacggtagaaaagagtcatgtaaacccatt
ctcaaggtcgaatacaagacctccagaaacagcagtgaagcctttgtaatcttttccgga
ggactttcgtatgataaggcaggacggagacccaccttaaccatcatgcatggcaaagcc
atcacagtgttagagatggactatccaatagtggacttcatggtgctctgtgacactccc
tatctcaacgaggtccaggagccatatgcggtggtggttctgctggagaaagatttcgtt
gtggtcgatttaacccagagcaattttcctatctttgagaacccataccccatggacgtc
catgagtctccagtcacgtgcactgcttactttgcagactgtccccccgacatcatacct
gtgctttactccataggagccaaacacaaaaagaccggctatagtcacaaggagtggccg
gtcagtggtggcacatggacgattggttcgcagacatatccagagattatcgttacagga
catgcagacggatcgataaagttttgggatgccacagcgatcacactgcagatgttgtat
aagctcaagacatcaaaggtatttgagaatcccaagagcggagacatgggacgcagcggc
gagcttgttgaggaagacccctacgccgttcagatgatcagctggtgcccacagagccgt
atcttttgtgttgtcggcatcagtgcccacgtcatcctgtaccgcttcagcaaatatgac
accaacaccaccatcacgtccttagaggtgcggctgcagtgtgagatggaggacgtcatc
tctccatcggacacggagaacactccgtgttattcagaccccagtggtctctcaccccaa
ccacaaccccccagtccccgcagcaacacgccggacagcacacgggacagcatcccttgc
ctcaaggttaaagatcgtatgatccgaatgcctcctggataccaggcggagctggtggtt
cagttattatggattgatggtgaaccgccacaacaaatcaccagcctggatttaaactct
gcctatggactgttggctgtaggtaattgcaatggtttggcagttgtggactacctgcag
aaaaccattctgctgtgtatgaacaccctggagctgtacggatccgcagaccctttccag
cgactaacacgctctcctcgcaaaaaccggcagtccacatcagacttttgcatgcgcggc
ctgtctaacttttattccgattcaaagaaacggatccgtacttcctaccagagccttacg
gagctttctgataatcaggtgtctttggacctagagaggagcaagtcacccacctcagca
ccctactccccttccctccataatgaccctcgaggcacaggggaacctgtgtccaacctc
cggtcctgccactacagccctgttttttacctgttggacaatgtcaagggaccaggcaga
aagttaagtctacccacagatcttaagactgatcttgatcatgtgaatggacattgcact
agccccacctcccagccctgtccatctgggagggccagagtcccggggggccctgaaggg
ccacgccttgcccgcagggggcccggccgaccgcccttccgcaaggcccagtccgccgca
tgcatggaggtctctttgcctgtgtcctccctcaccgaaggtcattcgtctcgacgagcc
atgctgcagcagttacacggagtcagtatgtactctcacgatgagcatcacatcaccacc
tactcctggagcgagagagagagtcgagaaaactcgttcagccgttcccggagctctagc
gtttccagcatagacagggagaccaaagaggccgtaaccaccctgcagtttatggagtca
tacgggcgtaaatcagaccccctgcccacgccatgcctgtgggtgggcacaagtctgggc
ctggtgcttatcatcccaatgtccatccctatggatgagcaggaacgtcaggaagacccc
gttactgtggtcccgactggcacagttttaatgctgaaaggctccattctgcggtttagt
ttcctggattttgggggcgctcttattcacagtccctacgaggtgtggcgggaccaacaa
gccccaggtgacccagatcgaccccgcaaacggaaactggtcaacttctcgccctcgtct
tctcaagaggccagtggagactgtcacttagccgtggtgtgttcggagaagcaggcaaag
gtcttcctaatgcccacccaggcctgtttatatgtacacaacatcaccgagtcatccttc
ctgctgcgggccgacgtggtgtcggtttgtaacagcgtttgtctggcctgcttctgtgcc
aacggacacatcatgactttgagccttcctagtttacggcctcttctagacatcaactac
ctgccgctaacggacatgcgcattgccagaacattctgcttcaccaacggcggacaggcg
ctgtatctgtgctcccccacagagatacagagaatcacttacagccaggagatgtgtgac
aacctacaggagatgttaggggagctctttacacccatcgagacccctgaggcaccgaac
cgtggctttctcaagggcttttttggcggcaatgcccaaacctttgaccgagaggagctg
tttggcgaggcatcagcgggtaaggggtcccgcagcctggcacaacacatcccaggacag
ggtggaatggagggcatgaaggcagcagcgggcggggtggttggggacctggcccgagct
cgtatcgccctggacgagagaggacagaggctgggggagctggaggagaggaccgctctg
atgatgagcagtgccgaaaccttctctaaacacgctcacgagttgatgctgaaatgcaaa
gacaagaagtggtatcagttttag
DBGET
integrated database retrieval system
