KEGG   Pimephales promelas (fathead minnow): 120486250
Entry
120486250         CDS       T08155                                 
Symbol
si:ch1073-15f12.3
Name
(RefSeq) laminin subunit beta-3
  KO
K06244  laminin, beta 3
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04382  Cornified envelope formation
pprm04510  Focal adhesion
pprm04512  ECM-receptor interaction
pprm04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120486250 (si:ch1073-15f12.3)
   04518 Integrin signaling
    120486250 (si:ch1073-15f12.3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120486250 (si:ch1073-15f12.3)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    120486250 (si:ch1073-15f12.3)
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN LAMB1 Laminin_I DUF8567 APG6_N CCDC39 GldM_1st
Other DBs
NCBI-GeneID: 120486250
NCBI-ProteinID: XP_039538072
LinkDB
Position
Unknown
AA seq 1156 aa
MKTWIFLSLAALSALCVAQQDCARGACYPPTGDLLLGREQNLRASSTCGLMGSEVVCAPH
GQWKMKCCPCDSRNPAAYNAHTIQNVMSSAGPNRWWQSKKDVSPVTLQLDLNGIYHLETV
LLSFKGPRPDALVIERTRDYGGSWEPVLYMATDCPSTFPQVSTSFPGRLQDTYCYTLPST
ADQPYRDQKVHFYPLHQFSNIDLPNEYKIEVASGFTGLRVNLTRLGPVPSLPGRGLSQFY
ALREMKVMGSCFCHGHTERCRSQTNTQVGGVCDCQHNTAGVNCERCDDFYNDLPWRPAES
GNTHTCKRCDCNNHSDRCHFDPRRYEETGRRSGGVCDGCSHHTTGPNCERCEQNYYPNPL
SDMRSPDACLRCLCDPAGSENGGQCDATGVCVCKANVEGDRCDRCKDGHYNLDANNPRGC
SKCSCSSVGSVSGACNQLTGQCVCRANTEGLACDRCAAGYWNPSSPNGCQPCDCDRNNAR
SATCDQRTGQCVCRPGIGGRTCSGCPDNTYGDPLIGCRPCDCEFSGTEPGGCDKRTGLCR
CKSGITGPRCDVCARGYCASFPECPACPSCFFSMNTDLQELTLGLERLSNSLLSSGGRPT
SSDSSRRIQTLQDTLALIQESVSVPPQSSRALTEALQRLNTLRSQMEGLRVDLPSAPRGR
ELERELDELQSLLSSLSLQYFSRRDTFTSTTGSTNASDFYAIQKSYNNSTDAVKRADATI
DTLKKTEGVRENALSGLDALQPGNTKDLQNLKTDLETRPNLTPAATKVCGSDRVEPCTPE
RCAGDLCPPDGAPPCGAEDACTGALPNANKAFQDADEVKAKLQDLNDKITQAAEQIQEAE
DSANRVRLSTDKLADQIKQVRADVDGDLKDTKDFINTLRDFLSEPHSDPEQVQRVCEAVL
EARLPMSLDQLKQKLKDLQDLMVSVPDSSSVLTTSGPQLENARRLLDAARDTRDAAFGIQ
QDGESLLKTMNENENIFDDLEDKIRQSVDIANDVKKDVERIEDLLVPAEQGIVGISGLMD
EIRPLVDTLRNDAATGTALANEAQDQANSAEDEADRAAQALEALKDEFERMKRAAAENTQ
AGEDGARLLKLQEEAESLMTDTSDIMKALIDKEASIRQRATEMEENGSRLTGLDAQVEKL
RDDIRYKVTSLNMCQG
NT seq 3471 nt   +upstreamnt  +downstreamnt
atgaagacgtggatttttctttctttagcagctctgtctgcactgtgtgtggcacagcag
gactgtgctcgaggcgcttgttacccgccgacaggcgacctgctcctgggccgagagcag
aacctgcgcgcctcctccacatgcggtctgatggggtcagaggtcgtctgcgcaccacac
ggacagtggaagatgaagtgttgtccgtgtgactcgcggaaccccgcggcctataacgct
cacacgatccagaacgtgatgtccagcgccggacccaaccgatggtggcagtccaagaaa
gatgtgagtccggtgacactacagctggatttaaatgggatttatcacctggaaacggtc
ctactatcgttcaagggcccgaggcctgacgcgttggtcatcgagaggaccagggactac
ggcggctcctgggagccggtcctgtacatggccaccgactgcccctccaccttccctcag
gtgagcacgtcgttcccgggacgcctgcaggacacctactgctacacactgccctccacc
gcagaccagccctacagggaccagaaggttcacttttatcctctccatcagttctcaaac
atcgatctaccgaacgaatacaaaattgaagtggcgtcgggcttcacgggtctgcgggtc
aatctgacccggttgggtccggttcccagtttgccgggccgaggcctgagtcagttctac
gccctgcgggagatgaaggtcatgggatcctgtttctgccacggacacacagagcggtgc
agaagccagaccaacacacaggttggaggtgtgtgtgactgtcagcacaacacggctggt
gtgaactgtgagcggtgtgacgacttctacaacgaccttccctggagacccgcggagagc
ggaaacacacacacctgcaaacgttgtgactgtaataatcactctgatcgctgtcacttc
gacccgcggcgttacgaggagacgggccggcgctctgggggagtgtgtgacggatgttct
catcacacaacgggacccaactgtgaacgctgcgagcaaaactactacccgaaccctctg
agtgacatgaggagccccgacgcctgcctgcgttgtctgtgtgaccccgcgggctccgag
aacgggggtcagtgtgacgcgacgggagtgtgtgtgtgtaaagctaacgtggagggcgac
cgctgcgaccgctgtaaagacggacactacaacctcgacgccaacaaccctcgcggctgc
tccaagtgctcctgcagttctgttgggtcggtcagcggtgcgtgtaaccagctgacgggt
cagtgtgtgtgtcgcgctaacactgagggtttagcgtgtgaccgttgtgctgctggttac
tggaacccgtcgtcgcccaacggttgtcagccatgtgactgtgaccgcaacaacgcccgc
agcgccacctgtgaccagcgcacgggtcagtgtgtgtgtcgtcctggcatcgggggccgg
acttgcagcggttgccctgacaacacgtatggagatccactgattggctgcagaccgtgt
gactgcgagttttcaggcacagagccgggcggctgcgataaacgcacaggcttgtgccgt
tgtaaatcaggcattaccggccctcgctgtgacgtctgcgcccgcggctattgcgccagt
ttcccagaatgcccggcgtgcccgtcctgcttcttcagcatgaacaccgacctgcaggag
ctcacgctcggtctggagcgtctctccaactccctgctgtcctctggtggacgaccgacg
tctagcgactcgagccgcaggatccagacgctccaggacacactcgctctgatccaggag
tccgtgtctgttcccccgcagtccagccgcgccctgaccgaagccctgcagagactcaac
acgctccggtctcagatggagggcttgagagtggatctgccgtctgcgcctcggggccga
gagctggagcgagagcttgacgagctgcagtcgctcctgtcgtctctgagtctccagtac
ttcagccgcagagacaccttcaccagcaccaccggatccaccaacgccagtgacttctac
gccattcagaagtcgtataataattcgactgacgccgtcaagcgagccgacgccaccata
gacaccctgaagaagaccgagggcgtgcgagaaaacgccctgagtggcctggacgccctg
cagcccggaaacaccaaagacctgcagaacctgaagacggacctggagacgcggcccaat
ctgactcccgccgccaccaaggtttgtggcagtgatcgcgtggagccctgcactccggag
cgctgcgcaggcgacctgtgtcctccggacggagcgcccccttgtggagcggaggacgca
tgcacaggagcactgcccaatgccaacaaggcctttcaggacgccgacgaggtcaaggcc
aaactgcaggatctcaacgacaagatcactcaagcagcggagcagatacaggaagctgaa
gattcggccaatagggtgcgactgtccactgacaagctggccgatcagatcaagcaggtg
cgagccgacgtggacggagacctgaaagacaccaaagacttcatcaacacactgagggac
ttcctgtcagagcctcactcagacccggagcaggtccagcgagtgtgtgaggcggttctg
gaggcccggctgcctatgagtctggatcagctgaagcagaagctgaaggatctgcaggat
ctgatggtctcagtgcccgacagcagcagcgtcctgacgactagcggcccgcagctggag
aacgccagacgcctgctggacgccgcccgcgacacacgagacgcagcgtttggcatccag
caggacggcgagagtcttctgaaaacgatgaatgaaaacgagaacattttcgatgaccta
gaggacaaaatccggcagagcgttgacatcgccaacgacgttaagaaagacgtagagcgg
atagaggacctgctggttcccgctgagcaggggattgtgggtatttcagggctgatggat
gagattcgccccctggtggacacgctgaggaacgatgcggcgacagggacagcgctggcg
aacgaagctcaagatcaggctaactcagctgaagacgaggccgaccgggccgcacaggcc
ctggaggctttaaaagacgagttcgagcggatgaaacgagccgcggctgaaaacactcag
gctggggaagatggtgctcgtttactaaagctacaggaggaggcggagtctctgatgaca
gacacctctgacatcatgaaggctctgatagataaagaggcgtccatacggcagcgagcg
acagagatggaggagaacggctcgcggttgaccggtctggacgctcaggtggagaaactc
cgtgacgatatccgctataaagtcaccagcctgaacatgtgccagggctga

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