Pimephales promelas (fathead minnow): 120486250
Help
Entry
120486250 CDS
T08155
Symbol
si:ch1073-15f12.3
Name
(RefSeq) laminin subunit beta-3
KO
K06244
laminin, beta 3
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04382
Cornified envelope formation
pprm04510
Focal adhesion
pprm04512
ECM-receptor interaction
pprm04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120486250 (si:ch1073-15f12.3)
04518 Integrin signaling
120486250 (si:ch1073-15f12.3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120486250 (si:ch1073-15f12.3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120486250 (si:ch1073-15f12.3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
Laminin_I
DUF8567
APG6_N
CCDC39
GldM_1st
Motif
Other DBs
NCBI-GeneID:
120486250
NCBI-ProteinID:
XP_039538072
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MKTWIFLSLAALSALCVAQQDCARGACYPPTGDLLLGREQNLRASSTCGLMGSEVVCAPH
GQWKMKCCPCDSRNPAAYNAHTIQNVMSSAGPNRWWQSKKDVSPVTLQLDLNGIYHLETV
LLSFKGPRPDALVIERTRDYGGSWEPVLYMATDCPSTFPQVSTSFPGRLQDTYCYTLPST
ADQPYRDQKVHFYPLHQFSNIDLPNEYKIEVASGFTGLRVNLTRLGPVPSLPGRGLSQFY
ALREMKVMGSCFCHGHTERCRSQTNTQVGGVCDCQHNTAGVNCERCDDFYNDLPWRPAES
GNTHTCKRCDCNNHSDRCHFDPRRYEETGRRSGGVCDGCSHHTTGPNCERCEQNYYPNPL
SDMRSPDACLRCLCDPAGSENGGQCDATGVCVCKANVEGDRCDRCKDGHYNLDANNPRGC
SKCSCSSVGSVSGACNQLTGQCVCRANTEGLACDRCAAGYWNPSSPNGCQPCDCDRNNAR
SATCDQRTGQCVCRPGIGGRTCSGCPDNTYGDPLIGCRPCDCEFSGTEPGGCDKRTGLCR
CKSGITGPRCDVCARGYCASFPECPACPSCFFSMNTDLQELTLGLERLSNSLLSSGGRPT
SSDSSRRIQTLQDTLALIQESVSVPPQSSRALTEALQRLNTLRSQMEGLRVDLPSAPRGR
ELERELDELQSLLSSLSLQYFSRRDTFTSTTGSTNASDFYAIQKSYNNSTDAVKRADATI
DTLKKTEGVRENALSGLDALQPGNTKDLQNLKTDLETRPNLTPAATKVCGSDRVEPCTPE
RCAGDLCPPDGAPPCGAEDACTGALPNANKAFQDADEVKAKLQDLNDKITQAAEQIQEAE
DSANRVRLSTDKLADQIKQVRADVDGDLKDTKDFINTLRDFLSEPHSDPEQVQRVCEAVL
EARLPMSLDQLKQKLKDLQDLMVSVPDSSSVLTTSGPQLENARRLLDAARDTRDAAFGIQ
QDGESLLKTMNENENIFDDLEDKIRQSVDIANDVKKDVERIEDLLVPAEQGIVGISGLMD
EIRPLVDTLRNDAATGTALANEAQDQANSAEDEADRAAQALEALKDEFERMKRAAAENTQ
AGEDGARLLKLQEEAESLMTDTSDIMKALIDKEASIRQRATEMEENGSRLTGLDAQVEKL
RDDIRYKVTSLNMCQG
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgtggatttttctttctttagcagctctgtctgcactgtgtgtggcacagcag
gactgtgctcgaggcgcttgttacccgccgacaggcgacctgctcctgggccgagagcag
aacctgcgcgcctcctccacatgcggtctgatggggtcagaggtcgtctgcgcaccacac
ggacagtggaagatgaagtgttgtccgtgtgactcgcggaaccccgcggcctataacgct
cacacgatccagaacgtgatgtccagcgccggacccaaccgatggtggcagtccaagaaa
gatgtgagtccggtgacactacagctggatttaaatgggatttatcacctggaaacggtc
ctactatcgttcaagggcccgaggcctgacgcgttggtcatcgagaggaccagggactac
ggcggctcctgggagccggtcctgtacatggccaccgactgcccctccaccttccctcag
gtgagcacgtcgttcccgggacgcctgcaggacacctactgctacacactgccctccacc
gcagaccagccctacagggaccagaaggttcacttttatcctctccatcagttctcaaac
atcgatctaccgaacgaatacaaaattgaagtggcgtcgggcttcacgggtctgcgggtc
aatctgacccggttgggtccggttcccagtttgccgggccgaggcctgagtcagttctac
gccctgcgggagatgaaggtcatgggatcctgtttctgccacggacacacagagcggtgc
agaagccagaccaacacacaggttggaggtgtgtgtgactgtcagcacaacacggctggt
gtgaactgtgagcggtgtgacgacttctacaacgaccttccctggagacccgcggagagc
ggaaacacacacacctgcaaacgttgtgactgtaataatcactctgatcgctgtcacttc
gacccgcggcgttacgaggagacgggccggcgctctgggggagtgtgtgacggatgttct
catcacacaacgggacccaactgtgaacgctgcgagcaaaactactacccgaaccctctg
agtgacatgaggagccccgacgcctgcctgcgttgtctgtgtgaccccgcgggctccgag
aacgggggtcagtgtgacgcgacgggagtgtgtgtgtgtaaagctaacgtggagggcgac
cgctgcgaccgctgtaaagacggacactacaacctcgacgccaacaaccctcgcggctgc
tccaagtgctcctgcagttctgttgggtcggtcagcggtgcgtgtaaccagctgacgggt
cagtgtgtgtgtcgcgctaacactgagggtttagcgtgtgaccgttgtgctgctggttac
tggaacccgtcgtcgcccaacggttgtcagccatgtgactgtgaccgcaacaacgcccgc
agcgccacctgtgaccagcgcacgggtcagtgtgtgtgtcgtcctggcatcgggggccgg
acttgcagcggttgccctgacaacacgtatggagatccactgattggctgcagaccgtgt
gactgcgagttttcaggcacagagccgggcggctgcgataaacgcacaggcttgtgccgt
tgtaaatcaggcattaccggccctcgctgtgacgtctgcgcccgcggctattgcgccagt
ttcccagaatgcccggcgtgcccgtcctgcttcttcagcatgaacaccgacctgcaggag
ctcacgctcggtctggagcgtctctccaactccctgctgtcctctggtggacgaccgacg
tctagcgactcgagccgcaggatccagacgctccaggacacactcgctctgatccaggag
tccgtgtctgttcccccgcagtccagccgcgccctgaccgaagccctgcagagactcaac
acgctccggtctcagatggagggcttgagagtggatctgccgtctgcgcctcggggccga
gagctggagcgagagcttgacgagctgcagtcgctcctgtcgtctctgagtctccagtac
ttcagccgcagagacaccttcaccagcaccaccggatccaccaacgccagtgacttctac
gccattcagaagtcgtataataattcgactgacgccgtcaagcgagccgacgccaccata
gacaccctgaagaagaccgagggcgtgcgagaaaacgccctgagtggcctggacgccctg
cagcccggaaacaccaaagacctgcagaacctgaagacggacctggagacgcggcccaat
ctgactcccgccgccaccaaggtttgtggcagtgatcgcgtggagccctgcactccggag
cgctgcgcaggcgacctgtgtcctccggacggagcgcccccttgtggagcggaggacgca
tgcacaggagcactgcccaatgccaacaaggcctttcaggacgccgacgaggtcaaggcc
aaactgcaggatctcaacgacaagatcactcaagcagcggagcagatacaggaagctgaa
gattcggccaatagggtgcgactgtccactgacaagctggccgatcagatcaagcaggtg
cgagccgacgtggacggagacctgaaagacaccaaagacttcatcaacacactgagggac
ttcctgtcagagcctcactcagacccggagcaggtccagcgagtgtgtgaggcggttctg
gaggcccggctgcctatgagtctggatcagctgaagcagaagctgaaggatctgcaggat
ctgatggtctcagtgcccgacagcagcagcgtcctgacgactagcggcccgcagctggag
aacgccagacgcctgctggacgccgcccgcgacacacgagacgcagcgtttggcatccag
caggacggcgagagtcttctgaaaacgatgaatgaaaacgagaacattttcgatgaccta
gaggacaaaatccggcagagcgttgacatcgccaacgacgttaagaaagacgtagagcgg
atagaggacctgctggttcccgctgagcaggggattgtgggtatttcagggctgatggat
gagattcgccccctggtggacacgctgaggaacgatgcggcgacagggacagcgctggcg
aacgaagctcaagatcaggctaactcagctgaagacgaggccgaccgggccgcacaggcc
ctggaggctttaaaagacgagttcgagcggatgaaacgagccgcggctgaaaacactcag
gctggggaagatggtgctcgtttactaaagctacaggaggaggcggagtctctgatgaca
gacacctctgacatcatgaaggctctgatagataaagaggcgtccatacggcagcgagcg
acagagatggaggagaacggctcgcggttgaccggtctggacgctcaggtggagaaactc
cgtgacgatatccgctataaagtcaccagcctgaacatgtgccagggctga
DBGET
integrated database retrieval system