Pimephales promelas (fathead minnow): 120486535
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Entry
120486535 CDS
T08155
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04137
Mitophagy - animal
pprm04144
Endocytosis
pprm04145
Phagosome
pprm04148
Efferocytosis
pprm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120486535 (rab5b)
04145 Phagosome
120486535 (rab5b)
04137 Mitophagy - animal
120486535 (rab5b)
04148 Efferocytosis
120486535 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120486535 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120486535 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120486535 (rab5b)
04031 GTP-binding proteins [BR:
pprm04031
]
120486535 (rab5b)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
120486535 (rab5b)
Endosome - Lysosome transport
120486535 (rab5b)
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120486535 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
120486535 (rab5b)
Exosomal proteins of colorectal cancer cells
120486535 (rab5b)
Exosomal proteins of melanoma cells
120486535 (rab5b)
GTP-binding proteins [BR:
pprm04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
120486535 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
120486535
NCBI-ProteinID:
XP_039538546
LinkDB
All DBs
Position
Unknown
AA seq
214 aa
AA seq
DB search
MSTRGTGRTNGSLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLADKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAQSTRSCCGN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccgcgggaccggaaggaccaatgggagcctaccgcagaccaagatctgccag
ttcaaactggtgctgctgggagatatggccgtcggcaagtccagcctggtgttgcgcttt
gttaagggccagtttgatgagtttcaggagactaccattggagctgctttcttggcacag
tctgtttgtctggacgacactacagtgaagtttgagatttgggacacggctggacaggag
cgctaccacagcttggcccccatgtactaccgtggagcccaggcggccattgtagtgttt
gacatcaccaagcctgaaacatttgagcgagcaaaggcgtgggtgaaagagctgcagcgg
caggccagtcccaacatcgtcattgctcttgcaggaaacaaggccgacctagcagacaag
agacttgtggagtatgaggaagctcagacatatgcagaagacacaggcttgcttttcatg
gaaacttctgccaagactgcaatgaatgtaaacgagttgttcctggccattgcaaaaaag
atgccaaaaacagacacccaaaaccccacgcatgctgcccgacacaggggtgtaaattta
caggacccagatgcacagtccactcgaagctgctgtgggaactaa
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