KEGG   Pimephales promelas (fathead minnow): 120486535
Entry
120486535         CDS       T08155                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04137  Mitophagy - animal
pprm04144  Endocytosis
pprm04145  Phagosome
pprm04148  Efferocytosis
pprm05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120486535 (rab5b)
   04145 Phagosome
    120486535 (rab5b)
   04137 Mitophagy - animal
    120486535 (rab5b)
   04148 Efferocytosis
    120486535 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120486535 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pprm04131]
    120486535 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pprm04147]
    120486535 (rab5b)
   04031 GTP-binding proteins [BR:pprm04031]
    120486535 (rab5b)
Membrane trafficking [BR:pprm04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    120486535 (rab5b)
 Endosome - Lysosome transport
    120486535 (rab5b)
Exosome [BR:pprm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120486535 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   120486535 (rab5b)
  Exosomal proteins of colorectal cancer cells
   120486535 (rab5b)
  Exosomal proteins of melanoma cells
   120486535 (rab5b)
GTP-binding proteins [BR:pprm04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    120486535 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 Tfb2_C
Other DBs
NCBI-GeneID: 120486535
NCBI-ProteinID: XP_039538546
LinkDB
Position
Unknown
AA seq 214 aa
MSTRGTGRTNGSLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLADKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAQSTRSCCGN
NT seq 645 nt   +upstreamnt  +downstreamnt
atgagcacccgcgggaccggaaggaccaatgggagcctaccgcagaccaagatctgccag
ttcaaactggtgctgctgggagatatggccgtcggcaagtccagcctggtgttgcgcttt
gttaagggccagtttgatgagtttcaggagactaccattggagctgctttcttggcacag
tctgtttgtctggacgacactacagtgaagtttgagatttgggacacggctggacaggag
cgctaccacagcttggcccccatgtactaccgtggagcccaggcggccattgtagtgttt
gacatcaccaagcctgaaacatttgagcgagcaaaggcgtgggtgaaagagctgcagcgg
caggccagtcccaacatcgtcattgctcttgcaggaaacaaggccgacctagcagacaag
agacttgtggagtatgaggaagctcagacatatgcagaagacacaggcttgcttttcatg
gaaacttctgccaagactgcaatgaatgtaaacgagttgttcctggccattgcaaaaaag
atgccaaaaacagacacccaaaaccccacgcatgctgcccgacacaggggtgtaaattta
caggacccagatgcacagtccactcgaagctgctgtgggaactaa

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