Pimephales promelas (fathead minnow): 120486543
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Entry
120486543 CDS
T08155
Name
(RefSeq) aryl hydrocarbon receptor-like
KO
K09093
aryl hydrocarbon receptor
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120486543
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120486543
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
bHLH_HIF1A
PAS_9
bHLH_NPAS4
PAS_4
Motif
Other DBs
NCBI-GeneID:
120486543
NCBI-ProteinID:
XP_039538559
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MYAGRKRRKPVQRSVKQPPNEGGKSNPSKRHRDRLNSELDRLASLLPFPEEVTSSLDKLS
ILRLSVSYLRAKNFFSVALKNHTSNGLSSNNSNRDNGKAAGLVDGWLNEGELLLQALNGF
VLVVTAEGIVFYCSHTIQDYLGFHQTDVMHQNVFDLIHTEDQQAFRHNLHWALNPPPTSK
QTEESSHDGDPAPSMSLVMCNPDQLPPENSSFLERNFVCRFRCLLDNSSGFLALNLLGRL
KFLHGQNRRLDDGGQMPPQLALFAIATPLQPPSIMEIRTKNMIFRTKHKLDFTPMACDAK
GKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTKDNRWKWV
QANARLVYKNGKPDYIIATQRPLVEEEGGEHLRKRSMHPFTFATGEAMLYQISYPMPGFP
DTLQGKGKNNKTKKTKVDKSSKDDVDPSSLLGAMMRQDESVYVCQPAMEPRMSFHSSLFN
EQGETSTFSSSENESWNPVQNGVTVVSKLEPSSFDPLLATLDSLSLETEESCSNSELFSA
LENLGLNAEDLELLLLDERMIQVEMEPDYIPSLNDLLTNNEILSYVHDSLENRIEDSADA
AASDSVEPPKTCSAPDSLPAPHIPFWPQKQIAPIIHLSQRMQQHLNGQSVCHKSESWNQA
STTDSETPAFNQHDTLLVNSVPVEHNGHWVSEHSQANLNSKLGDKITSKAQPPQWQHNQL
LVPFQYKQKTVEDSDTPPNGVYDDPQWHGYNFTEQLVSNRPCFPNGQKAHTQTLGTHVDC
NMTDNSEVDFTMNSSSAVDAGQFQAAMAWSSSHQQGYQKQQQQPKFAPNYYASYTKQNSS
LEHILGLVTPSNLPSLTDYGSELTHDTTHSKMETGFILNSTSVAYSGSCLVPNGNAVATP
GNSPHPLPEPLLPPPDPQTTGLYL
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctgggcgaaaaagaagaaaaccagtgcaaagatcggtgaagcagcccccaaat
gaagggggtaagtctaacccgtccaaacgccatcgagaccggctaaactccgagttggac
cgtctggccagtctccttccgtttcctgaggaggtcacgagcagcctggacaaactctcc
atcctgcgtctgagtgtcagttacctgcgtgctaagaacttcttctctgtcgcactgaaa
aaccacacctccaatggtttgtcgtcgaacaacagtaaccgtgacaacggtaaagcagcg
ggattggttgacggctggctgaatgagggagagctcctactacaggcgctcaatggcttt
gtgttggtggtcactgctgaggggattgttttctactgttctcacaccatccaggattat
ttaggattccaccagacggatgtgatgcatcaaaatgtcttcgatctcattcatactgaa
gaccagcaggccttcagacacaacttgcactgggctctgaacccacctccaaccagcaaa
cagacagaagaatcctcacacgatggagatcctgccccaagtatgtctctggtgatgtgc
aaccctgaccagctgcctccagaaaactcctctttcctggagagaaattttgtctgtcgt
ttccgatgcctcctagacaattcctctggattcctggccctgaatcttctagggcgtctg
aaattcctgcatggacagaacagacgattggatgacggaggccaaatgccaccccagctc
gccctttttgccatagcaacgcccctacagcctccttccataatggagatccgaaccaag
aacatgattttcagaaccaaacacaagttggacttcacaccaatggcctgtgatgctaag
ggtaaaatcgtccttggctacacagaggcagagctgcgagttcgaggttcagggtatcag
ttcatccatgcagccgacatgctctactgcgccgagaaccatgtcaggatgatcaagact
ggagaaagtggcctgactgtgtttagactgcttacaaaggacaaccgttggaaatgggta
caagctaatgctagacttgtctacaaaaatggcaagcccgactacatcattgccacccag
aggccgcttgtagaagaagagggcggagagcatttgaggaagcgatctatgcatcctttc
acctttgcaactggagaagcaatgctgtaccaaatcagctaccccatgccaggcttcccc
gacacccttcagggcaagggcaagaacaacaaaaccaaaaagaccaaggtggacaaaagc
tcaaaggatgacgtggacccaagttctctgctgggagccatgatgagacaggacgagtct
gtttatgtttgccagcctgctatggagccaagaatgtcattccacagtagcctcttcaat
gagcaaggagagactagcactttctcttcttccgagaatgaaagttggaatccggtgcag
aatggtgtaaccgtagtctccaaactggagccatcaagttttgacccactactggcaaca
ttagactctctgtccctggaaactgaggagagctgctctaacagtgagctattcagtgcc
ctggaaaatcttggactcaacgcagaggacctggagttgctgcttctggatgagaggatg
atccaagtagagatggaaccggattacattccatctctgaatgatcttctcaccaataat
gaaatcctctcctacgtccacgactctctggagaaccggatagaggactcggcagatgcc
gcagcatcagattctgttgaacccccgaagacatgttctgctcccgactcactacctgct
cctcacatccctttctggcctcaaaaacagatagcacccataattcatctctcacagcgt
atgcagcaacatctcaatggccagtcggtttgccacaagtccgagagttggaaccaggcg
tctacaacagactctgagactcctgcttttaaccagcatgatacactgttggtgaactca
gtaccagttgaacacaatggtcattgggtctctgaacactcacaagccaacttgaactct
aaacttggtgacaagataactagtaaagcacagccaccgcaatggcagcacaaccagttg
cttgtcccattccagtataaacagaaaacagttgaagatagtgacacccctccgaatggg
gtctacgacgatccccagtggcatggatacaacttcacagagcaattggtctcaaatcga
ccttgttttcccaatggccaaaaggcacacactcagacattgggtacccatgttgactgc
aatatgactgacaattcagaggtggattttacaatgaacagcagttcagctgtggatgca
gggcagtttcaggcagccatggcttggtcttcgtcccatcaacagggttatcagaaacag
cagcagcagccaaagtttgcacccaattattacgcctcttataccaaacagaactcctct
ctggagcatatcctgggattagtcacaccttcaaaccttccctcattgacagattatggc
tctgaactgacccatgacaccacccacagtaagatggagacaggctttatactcaactcc
actagtgtggcctactcaggaagttgtttggttcccaacggcaatgcagtggccacaccc
ggcaacagtccccacccccttcctgagcccctcctacctcccccagaccctcagactact
ggtttatacctctga
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