KEGG   Pimephales promelas (fathead minnow): 120486825
Entry
120486825         CDS       T08155                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pprm  Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pprm03036]
    120486825 (kdm4b)
Enzymes [BR:pprm01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     120486825 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     120486825 (kdm4b)
Chromosome and associated proteins [BR:pprm03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120486825 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN PHD DUF4537 53-BP1_Tudor C1_1 Tudor_5
Other DBs
NCBI-GeneID: 120486825
NCBI-ProteinID: XP_039538920
LinkDB
Position
Unknown
AA seq 1142 aa
MDPSLPPDPNPEALAKPEPALDVTPQAETAPDLPVEPVDSNPQPCEEPVSDPAPEPAPDI
KPEPSAPEITPELQIPEPRIPEPAPPPAANSSYKIMTFRPTMEEFKDFGKYMAYIETQGA
HRAGLAKVIPPKGWKPRRCYDSIEDMVIPAPIMQVVTGQSGLFTQYNIQKKSMTVGEYRK
LANSKKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDPEITEWNIGHLNTLLDM
VEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQPKSWYAIPPEHGKRL
ERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKYSIPFDRITQEEGEFMITFPYGYHAGF
NHGFNCAESTNFATLRWIDYGKMATQCTCRKDMVKISMDVFVRCLQPDRYDQWKQGKDTT
VLDHQKPTILSSPELEHWRKNRVTFREKLLRRSQAKLKQFRRLKPEEVKVLVEEGVELDM
SEYMRKVEEREEQRRQQRDERMAKEAMLTLEALEREEQEQAEAALRGGGGEEDGKTDLQD
PLPENGEKKKRKKKKPKHPDEISFQQAFEQFAAVSEMQTQSSGAAPLSGLQPSPFTKLKK
KVEVKKSRRHPLSKPPMRSPHSIVKQENSSDEELYSGLQAGGGSVTETKKDLWQNLLQNC
LPNFLTEKQFNVAMATIEPHCAVCTLFCPYTQSVKDSFHVSDPSGLVSRVGCRTRPLVPE
MCFSAGAENTEPLPSNSHIGDDGTSVLLSCESCGLQVHASCYGVNPETKQDDWMCSRCTS
MEWTAACCLCSLRGGALKKTTDDRWVHVICAVAVAEARFVGAVEREPVDVSSVPDTRKSL
KCVYCHKTTKQNFGACIQCSSDNCSTSFHVTCALLAGVTMKPADWPYVVSVTCHKHKHAN
QKLKSSSRELSLGQEVIGRSSNGWFYRCTITGIGTQNYYEVNFDDGSYCDNVFPENLLSH
DCLRNGPPEQGEIVVVKTIDGRILNASFVKEHVHRSYQVEFQDETQILLKRSEIHSLNQE
LPKRVMSRLASVNQQQPQAQPSDEPLAAKRPRLPTPPPMLAIEPSALPPELITAFLPASI
TPNISTPPCLPPASLPVSAPTLPVPEPSESYTHSSSYIAYMESLLNSDFPPEEDEQGVEP
MY
NT seq 3429 nt   +upstreamnt  +downstreamnt
atggacccgtctttacctccagacccgaaccccgaggccctcgcaaaacccgaacccgct
ttagacgtgactccgcaagcagaaactgctccagatttaccagtagaaccagtagactcc
aatcctcagccatgcgaggaaccggtttcagatccagccccggaaccggccccagacata
aaaccagaaccatcggcaccagaaatcacaccagaactacaaatcccagaaccacgaatc
ccagaacccgctcctcctccagcggcgaactcctcctacaagatcatgaccttcagaccc
accatggaggagttcaaggactttggaaagtacatggcctacatcgagactcaaggagct
catcgtgcgggtctggcgaaggttattccaccgaaaggctggaagccacggcgctgctac
gatagcattgaagacatggtcattcccgctcccatcatgcaagtggtgaccggccaatcg
ggactcttcactcaatacaacatccagaagaagtccatgacggtcggggaatatcgcaaa
ttggccaatagtaaaaagtactgcacccctcgacacaaggactttgatgacctggaaagg
aagtattggaaaaacctgacgttcgtctcgcccatttacggtgctgatgtcagcggctcg
atctacgacccggaaattacggagtggaacatcggccatctgaacactcttctggacatg
gtggagcaggagtgtgggatcgtcatcgagggggtgaacaccccgtacctgtacttcggc
atgtggaaaaccacctttgcctggcacacggaggacatggacctctacagcatcaactac
ctgcatttcgggcaaccaaagtcctggtatgcgattcctcccgagcacggcaagaggttg
gagaggctggcacaaggtttcttcccgggaagctctcagggctgcgacgcgtttctccgg
cacaagatgaccctcatctctccatccatcctgaagaagtacagcatcccgttcgacaga
atcactcaagaagagggcgagttcatgatcacgttcccgtacggatatcacgccggattc
aaccacgggttcaactgcgccgaatccaccaacttcgcgaccctacgatggatcgattac
ggcaagatggccacgcagtgtacgtgccgtaaggacatggtgaagatctccatggacgtg
tttgtgcgctgtctgcagcccgatcgctacgatcagtggaagcagggcaaagataccacg
gtcctggaccaccagaagcccacgatcctctccagccctgagctggagcactggaggaag
aacagggtcacgttcagagagaaactcctgcgcagatcacaggcgaagctgaagcagttc
cggcgcctgaagccggaggaggtgaaggtgctggtggaggagggcgtggagctggacatg
agcgagtacatgcgtaaggtggaggagcgagaggagcagcggcggcagcagcgggacgag
cgcatggcgaaggaggcgatgctcacgctggaggcgctggagagggaagagcaggagcag
gctgaagcagcgctccgtggaggaggaggagaggaagatggaaaaacagatttgcaggat
cctctgccggaaaatggagagaagaagaagaggaaaaagaagaagccgaagcatcccgac
gagatctccttccagcaggcgtttgagcagttcgccgcggtgagcgagatgcagacccag
agctctggagccgcccctctgtccggcctgcagccgagtcccttcacaaagctgaagaag
aaggtcgaggtgaagaagagcagaaggcatccactcagcaagccgcccatgcgatcgcct
cactccatagtcaaacaagaaaactccagcgacgaggagctgtactcaggacttcaagca
ggcggaggctcggtaacggagaccaagaaggatctgtggcagaacctgttgcagaactgc
ttgccaaacttcctcaccgagaagcagttcaacgtagcgatggcgaccatcgagcctcac
tgcgccgtgtgcacgctgttctgcccctacacacagtcggtaaaggactcgttccacgtc
tcggacccgtctgggctggtgtcccgggtcgggtgtcgaacccgtccgctggttccagag
atgtgcttcagtgccggtgccgaaaacactgaacccctgccgtcgaactcccacatcggt
gacgacggcaccagtgttcttctgtcctgtgaaagctgtggccttcaggtccacgccagt
tgttacggagtcaatcccgagacgaaacaggacgactggatgtgttcccgatgcacctcg
atggagtggacagccgcctgctgtttgtgcagtttaagaggaggagctttgaagaaaacc
acagatgacaggtgggtccacgtgatctgtgcggtggctgtggccgaggctcgtttcgtc
ggcgctgtggaacgagagcctgtggacgtgtcctctgttcccgacaccaggaagagtctg
aagtgcgtctattgccacaagacgaccaagcagaacttcggcgcgtgtatccagtgctcg
tcggacaactgctccacatctttccacgtcacctgtgcgctcctcgccggagtcacaatg
aagccggccgattggccgtacgtggtgtccgtcacctgccacaaacacaagcatgccaat
cagaagctcaagagcagctcgcgcgagttgtctctgggtcaggaggtcatcgggaggagc
agcaacggttggttttatcgctgcaccatcaccggcatcggcacgcagaactactacgag
gtcaactttgacgacggctcctactgtgataacgtcttcccagagaacctgctgagtcac
gactgcctgcggaacggccctccagaacagggcgaaattgtggtggtcaagacaatcgac
ggacggattctcaacgcgtcttttgtcaaggaacacgtccaccgatcctaccaggtggag
tttcaggacgagacgcagatcttactgaaacgcagtgagattcactctctaaaccaggag
ctgcccaagagggtcatgtctcgtctggcatctgtgaaccaacaacaacctcaggcccaa
ccgtcagacgaaccgctggccgcgaaacgcccgcgtctgccgacaccgccacccatgcta
gccatcgagccctcagcgctacctcctgaattaatcaccgctttcctgcccgctagtatt
actccgaacatcagcacccccccttgcttgccacccgcgtcacttcctgtctcagccccc
acacttcctgttccagaacccagcgagagttacacccacagctccagctacatcgcctac
atggagtctctcctcaactcggactttcctccagaagaggacgaacaaggcgttgagccg
atgtattga

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