Pimephales promelas (fathead minnow): 120486864
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Entry
120486864 CDS
T08155
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120486864
04121 Ubiquitin system [BR:
pprm04121
]
120486864
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120486864
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120486864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
120486864
NCBI-ProteinID:
XP_039538967
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MAVTLVAKPNVTSPVWEHFGFLPNEKGEPANLDEPICKICGKKVPVTRGNTSNLRCHLAN
CHPSINAQLPPQVSGRGATSKRTTETGTSSRQLGVAEAFGKSVKYSRESNRHKCLTDAVT
QYLVQEMVPFNTVEKPAFKSMLQKFDKQYELPGKTYFSETAVPKMYSTVKTSIKSELMNI
DYFSATTDMWSSVNMTPYMSLTVHYLSTEWVLKSRYLETVFMPENHTSDNISDALRHTFE
EWSLDEKKLACITTDNGANIVAAVKKLNWPWLNCFGHNLHLAVTNAMASVKDRTARAMGL
CHTLVSTFSQSWLKRRDVAKAQAELKIPQHGLILDCATRWGTKQKMVERVLEQIPAIRRV
LDDRRHQHLNPSWQDIAVLESVNAALKPAAEFTDLLSGESYVTVSSVKPVLKLLTEEMLK
PSSEDTTLTSDIKNKMCSVLHGKYEPAALQNLLAKACCLDPRYRGDHINDTETKSALFEE
MVGVADEETAVRAPAPEVGDEGQAMVPPVAKKKTLGDLLKSRTTSASAPIPKRAR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcactctcgtcgcaaaacctaatgtcacgtcgccggtttgggaacatttcggc
tttctacccaatgaaaagggcgagccagcgaatttagatgagccaatatgcaaaatctgc
ggcaaaaaggttcctgtgacacgcggcaatacatctaatttgaggtgtcatctcgctaac
tgtcatccatccattaatgcacagctgccccctcaagtatcaggtcgcggagcaacttca
aaaagaacaaccgagaccggtaccagcagccgacagttaggagtagctgaagcctttggg
aaatctgtaaaatacagccgtgaaagtaacaggcataaatgccttacagatgctgttacc
cagtatttagttcaggagatggttccattcaacacggtggagaaacctgcattcaagtca
atgcttcaaaaattcgacaagcagtacgagttgccgggcaaaacctacttttcagaaact
gctgttccaaaaatgtacagcacggtaaagacatcgatcaaaagcgagctgatgaatatt
gactacttttctgccacaaccgatatgtggtcaagtgtcaatatgactccttatatgagt
ctaacggttcattatctcagcacagaatgggttctgaaatcacgttacctcgaaacagtg
ttcatgcccgaaaaccacacgtccgacaatatttcagatgctctccggcacacatttgaa
gaatggtccctggatgagaaaaagctggcctgtatcactacagacaatggggccaacatt
gttgcagcagtcaaaaagttgaactggccttggctgaactgctttgggcacaatttacat
ttggcagttacaaacgcaatggcaagcgtcaaagaccgcacagcccgagcaatgggcctg
tgtcacacactggttagtacattttctcaaagctggttaaagagaagagacgtagcaaaa
gcacaagctgaacttaaaattcctcagcatggcctcatactggactgcgctacgagatgg
ggcaccaaacagaaaatggtggaaagagttttagagcaaatcccggctatcagaagagtt
ctggatgaccggagacatcaacatctaaatccaagctggcaggacatcgctgtccttgag
tccgtgaacgcagcactaaaacccgcagctgagtttacggatctgctgtctggcgagagt
tacgttacagtgtcttcagtcaagcccgtcctgaaactcctgacagaagaaatgcttaaa
ccatcctccgaggataccaccttaacatcggacataaagaacaaaatgtgtagtgttcta
catgggaagtatgaaccagctgccttacaaaatcttttggcaaaggcgtgttgtttagat
cctcgatatagaggtgatcatattaatgacacggagacaaaatccgcactcttcgaagag
atggtgggagtggcggacgaagagaccgctgtccgtgcacctgcgccagaggttggagac
gaagggcaagcgatggtgccacctgtagcaaagaaaaagactcttggagacctgctgaag
tcacggacaacatccgcgtcagcgcccatacccaagagagcgcgatga
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