Pimephales promelas (fathead minnow): 120486962
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Entry
120486962 CDS
T08155
Symbol
tnfsf13b
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04060
Cytokine-cytokine receptor interaction
pprm04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120486962 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120486962 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pprm04052
]
120486962 (tnfsf13b)
04090 CD molecules [BR:
pprm04090
]
120486962 (tnfsf13b)
Cytokines and neuropeptides [BR:
pprm04052
]
Cytokines
Tumor necrosis fators
120486962 (tnfsf13b)
CD molecules [BR:
pprm04090
]
Proteins
120486962 (tnfsf13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
XRN_M
Saf4_Yju2
Motif
Other DBs
NCBI-GeneID:
120486962
NCBI-ProteinID:
XP_039539060
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MPAEDFGPGRGEKRRLPWLFLVLVVAAVTTSSLSVISLYHVLALKAEVEGLRAEVFRKRE
EKSGTLEESMKGAEKQTHQQEQEDINGRIEYMQQTEIHETTTDHTGMSKRSVGHVSNKAE
SQAFLQMMADNRKKTFQKEFALELSTAIPWHVGLKRGSALEEDQDTILVKEEGFFFIYSQ
LCFSQVYYTDSTFAMGHIVIRIKKNVVGDESQHVVLFRCIQSMNRVNHFNTCYTGGVVKL
DSGDRLELLIPRTHANISLDGDSTFFGAIKLA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaggattttggtccaggtcggggtgaaaagagaaggctaccctggctgttt
ctggtgctggttgttgctgccgtcaccacctcctccctgtctgtgatctccttgtaccat
gtgctggccttgaaggccgaggtggagggtttgagggccgaggtgttccgcaaaagagag
gagaaaagcggaacgctggaagaatccatgaagggggcagaaaaacaaacccatcagcag
gaacaagaagacatcaatggcagaattgagtatatgcagcagactgagatacatgagacc
acaacagaccatactggcatgtcaaaaaggagtgtggggcatgtctcaaacaaagcagaa
tcccaagccttcttacagatgatggcagacaacaggaagaaaaccttccagaaagagttt
gctttggaattaagcacagctatcccatggcacgtcggcctaaagcgcggctctgctctg
gaggaagatcaggacaccattttagtcaaagaggaaggattcttctttatctatagtcag
ctttgcttttcccaggtctactatacagactcgacgttcgctatgggccacattgtgatt
cgtataaagaaaaatgttgttggagacgagagtcagcacgtcgttttgttccgctgtatt
cagagcatgaatcgagtcaatcacttcaacacctgctacactggaggtgtagtgaaactg
gactctggggacagactggaacttctgatacctcgtacccatgctaatatctctctggat
ggggattccaccttctttggagcaataaaactggcctga
DBGET
integrated database retrieval system
