Pimephales promelas (fathead minnow): 120486985
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Entry
120486985 CDS
T08155
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
120486985 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120486985 (xrcc5)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
120486985 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
Peptidase_M57
DUF2997
Motif
Other DBs
NCBI-GeneID:
120486985
NCBI-ProteinID:
XP_039539084
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MARAAKSALVLCMDVGFSMSNSEPGHEPPFEQAKKVIQKFVQRQVFAENKDEVALVLFGT
DGTKNRLAKDGEYENITVHRHLMMPDFELLQEIESELQPGGQQADWLDALVVCMDLLQNE
TMGKKNDRLNIVLLTDLNVQTSEDQLDVIIQNLKKAGITMQFFLPFPVDDEDRANGDGDG
PGPSAAPPRPGKGLNKQQKQGLEMVKNIMTSLEEEDGLEEVYTFSDALEKLSIFKRIDRR
PMAWPCQMTIGSSLSIRIVGYKAVTEEKVKKSWAVVDAQSHQRDDVKRESVYCLNDDDET
EVQRDDTIQGFRYGSDIVPFSKVDEDQMKYKHDGKCFAVLGFTKQEAISRHQFMGSQVVK
VFAPRDDEHAAVALSALIHALDGLKMAAIVRYAYDRRSNPQVGAAFPCIKKKYECLLYVQ
LPFMEDLRHFSFPMLENNKKFMPSESQLSAVDSLIDSMMLVEEDEDGESVDIFKVNHIPN
PQFQRLFQCLHHRGVNPDGPLPPIEPWLKAALERPQAVSTRCQAPLQDVKTKFPMKVVLK
KKEQKTSADVFGISTDEPDVKRVKVDEETEFNLAEIAQGNVTSVGSINPSRDFCTLIRQK
TVSFDQACQQLTHRIEQLLGNRSSEYYTRSIACIQAFRDQSVSSGNAELFNTYMQSLKRS
VPDRNLQEFWDLLRQDALTLISKDEVDGSTFSKQDANQFLAFEQKEEEPAAPAQDDTGDV
DDLLDMM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagcggcgaagtcagcgttggtgctgtgcatggatgtgggtttctccatgagc
aactccgagccgggtcatgaaccgccctttgaacaagccaaaaaagtcatccagaagttc
gtccagcgccaggtgtttgctgagaataaagacgaggtggctctggtgctgtttgggact
gatggcactaagaaccgtctggccaaagacggggagtacgagaacatcacggtccaccgg
cacctcatgatgcctgactttgagctgctccaagagatcgagagtgaacttcagcctggt
ggtcagcaagcagactggcttgatgctcttgtggtttgcatggaccttctgcagaacgaa
accatggggaagaaaaacgatcgtctgaacatcgtcctgctgacagatctgaacgtacag
acctcggaggaccagctggacgtcatcatccaaaacttgaagaaagctggcatcaccatg
cagttctttttgccgttccctgtggatgatgaggacagagcgaatggtgacggggatgga
ccagggccatcagcggctccaccccgtcctggaaaaggcttgaacaaacagcagaaacaa
ggactggagatggtcaaaaacatcatgaccagcctagaggaggaggacggcctggaggag
gtctacacctttagtgatgctctggagaagctgtccatctttaagcgcatcgacaggagg
ccgatggcttggccctgtcagatgaccatcggcagctcgctgtccatccgcatcgttgga
tacaaagcggtgacggaggagaaggtgaagaagtcctgggccgtcgtggacgctcagagt
caccagcgggacgacgtcaagagggaatcagtttactgcctgaacgatgacgatgaaacc
gaagtacagagggatgacactatccaaggtttccgttatggaagtgatattgtgccgttt
tcaaaggtggacgaggaccagatgaaatataagcatgatgggaagtgttttgctgtgctt
ggcttcactaaacaggaggcgattagtcgtcatcagtttatgggaagccaagttgtcaaa
gttttcgctcccagagatgatgagcatgcggcagtggctctgtccgctctgattcatgcc
cttgacggtctaaagatggcagcgatcgtgcgttatgcttacgatcgccgcagcaatcct
caagtgggcgccgcctttccctgcatcaagaagaaatatgaatgtctgctgtacgtccag
ctgccctttatggaggatctccgacatttctccttcccaatgttggaaaacaacaagaag
ttcatgccctcagagtctcagctgtcagccgtggactcgctgatcgactccatgatgctg
gtggaagaggatgaggatggagagagcgtggacatctttaaagtcaaccacataccaaac
ccacagttccagagactgttccagtgtttgcatcaccgcggtgtgaatcctgatggtccc
ctgccgcccatcgagccctggctgaaagcggccctcgagcgaccccaggccgtgtccacg
cgctgccaggctcctctgcaggacgttaagaccaagttccccatgaaagtggtgctgaaa
aagaaagagcagaagacaagcgcagacgtgttcggcatcagcactgatgagccagatgtg
aagagagtcaaagtggatgaagagacagagtttaacctggctgagattgcgcagggcaac
gtcacatcggttggcagcatcaatccttcgagagatttctgcacactgattagacagaag
accgtctctttcgatcaggcgtgccagcagctgacccacaggattgagcagttgctgggc
aacaggagctctgagtactacaccaggagcatcgcatgtatccaggcgttcagggatcag
tctgtgtcgagcggaaacgcagagctgttcaacacttacatgcagtccctgaagaggagc
gttcctgacaggaatcttcaggaattctgggatctgcttagacaagatgctctgacgctc
ataagcaaagatgaagtggacggaagcaccttctccaaacaagacgcaaaccagttcctg
gcgttcgagcagaaggaggaagagccggcggctccggctcaggatgacactggagatgta
gatgatctgctggacatgatgtaa
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integrated database retrieval system
