Pimephales promelas (fathead minnow): 120487084
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Entry
120487084 CDS
T08155
Symbol
fer1l6
Name
(RefSeq) fer-1-like protein 6 isoform X1
KO
K22127
fer-1-like protein 6
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120487084 (fer1l6)
Membrane trafficking [BR:
pprm04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120487084 (fer1l6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
dsRBD2
Motif
Other DBs
NCBI-GeneID:
120487084
NCBI-ProteinID:
XP_039539205
LinkDB
All DBs
Position
Unknown
AA seq
1817 aa
AA seq
DB search
MDRDRDRAAPHGRKFPMKGKKKHRKGHKGVVIANKSALEAESETNPGDPEVIDVPQPELP
EASTSTHASFRQNANTKRCKPVVRILEAESKPQHFQISINITEARQLIGDNIDPSVVIEI
GDEKKQSSVKEGTNAPFYNEYFVFDFFCNQDIFFDKVIKLSVMHSKIMKSYCVGMFKIDV
GTVYSQPGHQFINKWATLTDPADIRRGVKGHLKCDISVSGKGDVSLPSQKFSDAEEQIDK
HLLIPEGLSPERPWARFYVIVYRAEGLPRINSSIMANVTKAFVGDTTALIDPYVEVSFFG
QVGRTSTQKSTAEPVWNEQVVFKEMFPPLCQRLKIRVLDEGSMNDVAIGTHYIDLHTISN
DNDGDNGFLPTFGPAWINLYGSLRNSTLVDDSQELNEGVGEGVSYRGRVYIELGVEILSG
GAESKSMLSRISLKDTKGGKAVAKDPKTGTGPGGDEEKSKTMGPEVMPVEPIQKINDEDM
ETFLLFGCVFEASMIDRRIGDRPIALEFTIGNFGNLIDGATPHPSKKRLEDGSVTTPLLD
TTATMACKSTTTPEKPHFGDIQRHYMHLPITAQKPCVYVYSSWEDRAYRLHHSNMLDTIA
LMFEEGISKVAELDKMLSPEAWTLMHHVLREFRSDAREFIAFAEKKVKGSNLTLLDKKRL
TLCKQELESMTEVAGGLLEPKRRSLSVKEMLLEVQKIKKKLRFLVEEPQHTLPDVFVCLV
SNNKRLAYARIPARHLLFSESPDQRGRSCGKIKTLFLKPPGKRGPGWTVQAKLDVYLWLG
TCRESSHMLNNLPSGFELGGISSEESTGHPPEHLLYTEKHMFQMRAHMYQARGLIAADNT
GLSDPFAWVSFLSNSQSTGIIKQTLTPTWNQLILINNVSLYGGLHEIVQEPPLVVIEVYD
DDAVGIEYLGSTVAVPVVKLAEEGYVPPQLQYSPLFCGGLSGGDILGAFELIQISESGEH
TLPDLDEPDGGVIPVPSYIRPVLCKYRIEVLFWGLRELKKVQLLSVDRPQVFIKCAGAGL
NSSVIQSYKKNPNFSILVDAFDVELPEDEHLLPPLTITVVDWRAFGRSTLVGSHVINNLA
LFKHIPLPIQQPQQEARNIAVAQLSLQQSVVPPPNVEIAIEIEHEQIITPTPQNEPDFED
KKVSKKSKRRSTKRKKRTTADESADNVIDWWSKYYASMQKIQQAKQKENNPFPLLFENVI
PLENIISEGLINLASGLKEKKREVNYKSVIEQPRLATLQVYDKELEAEFGPFDDWVKTFE
LYRGKANEEDGSADERFVGKFKGRFCLCKLPETDDEEEDGYLDSGQFKINQGIPANTAVE
VLIRVYIVAAFNLHPADPDGKADPYIVLKLGKTEIKDRVNYIPKQLNPVFGRSFEFQATF
PKESLLTILIYDYDTVGGDDLIGETQIDLENRFYSRHRATCGLPSEYAIEGYNAWRDCIK
PTDLLIKLCKENRLDNPHFSPGHITIGNKVFTGKTVFADEDQMVESYEHLALKVLHRWSE
MTSGACKLVPEHIETRALYLKDKPGIDQGHLQMWVDIFPMDMPHPGPPVDISPRKPKGYE
LRIIIWNTEDVILEDTNFITGQQSSDIYVKGWLKGLEDDGQETDVHYNSLTGEGNFNWRF
VFPFNYLPAEKVVVVQKRESIYSLDKTEQKIPAVLVMQVWDFERLSSDDFLGSVELDLHG
FPHGAKSAKACKMEMLTVTTENISIFQQKRSKGWWPFIKAGELTGKVEAEFHLVTAEEAE
KNPVGRARKEPEPLEKPNRPDTSFSWFMNPFKCFFHLIWGNYKKYIIAGLVLLIVTLFLV
LIFYTLPGAISSKIVNG
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagacagagaccgcgctgcgcctcatggcagaaagtttccaatgaaagggaag
aagaaacacaggaaaggacacaagggtgttgtgattgcaaacaagagtgctctagaggca
gagtctgaaactaatcctggtgatccagaggtgatagacgtaccacagcctgaactccct
gaagcgtccacctcgacacacgcttccttcagacagaatgctaatactaagaggtgtaaa
cctgtggtcaggatcttggaagctgaaagcaaaccacaacatttccagatctccatcaat
ataacagaggctaggcagctgatcggggataatatagatcctagtgttgtgattgaaatt
ggagatgagaaaaagcaatcatctgtgaaagaaggaaccaatgctcccttttacaatgag
tattttgtatttgacttcttttgcaatcaagacatcttttttgacaaagtcatcaaacta
tcagttatgcactcaaagatcatgaagagctactgtgtgggaatgttcaagattgatgtc
ggcacggtttactcccagcctggccatcagttcatcaataagtgggccacgctcacagac
cccgctgacatccgcagaggggtgaaagggcacttgaagtgtgatatcagcgtgtcagga
aagggagatgtttcgctaccctcccagaagttcagtgatgcagaagaacagatagacaaa
cacctcttgattcctgaaggcttaagccctgaacggccatgggctcggttttacgtgata
gtgtaccgagctgaaggtcttcccagaataaactccagtattatggccaatgtgaccaaa
gcctttgttggagacacgacagccctcatagatccttacgtagaggtgtcattcttcggt
caagttggccggacgtctactcagaagagcacagcagaaccagtatggaacgagcaagtg
gtgtttaaggagatgtttcctccactgtgtcagagactgaaaatccgggttctggatgag
ggaagcatgaacgatgtggctattgggactcattacatcgatctgcacaccatctcaaac
gacaatgatggagacaatggtttcctgcccacattcggaccggcatggatcaacctttac
ggctcacttcgtaattccacgctggtggacgacagccaggagctgaacgagggtgttgga
gagggggtgtcctacagaggcagggtttacattgaactcggtgtggagatcctgtctgga
ggtgcagaatctaaatccatgctttcaaggatcagtctgaaagataccaagggagggaaa
gcagtggcgaaagatcccaaaactgggacaggacctggaggtgatgaggagaagtccaaa
actatgggacctgaggtgatgccagtggagcccatacagaagataaatgatgaagacatg
gaaaccttcctgctgtttggctgtgtgttcgaggcttccatgattgacagaagaatcggt
gatagacctatcgcccttgagttcaccattggtaactttgggaacttaattgacggcgct
acacctcatccttcaaagaaaaggcttgaagatgggtcagttaccactcctcttctagac
accacagcaacaatggcatgcaaatccactacaacaccagagaaacctcatttcggagat
attcagaggcactacatgcacttgcccatcacagcgcaaaagccctgtgtgtatgtttat
agcagctgggaggatcgagcttaccgactccatcattccaacatgctcgacactattgcc
ttgatgtttgaggagggaatctctaaggtggcagaattggataaaatgttgtctccagag
gcgtggactctcatgcaccatgttcttcgggaatttagaagtgatgccagggagtttatt
gcatttgctgaaaagaaggtgaagggaagcaacttgaccttactggataaaaagaggctc
accctgtgtaaacaggagctggagagtatgactgaagtagcaggaggactgcttgagcca
aagaggagatctttgagtgtaaaagagatgctgctggaagtccagaaaattaaaaagaaa
ctgagatttctggtggaagagcctcaacacactttaccagatgtgtttgtgtgtctggtc
agtaataacaagcgtctggcgtatgccagaatccctgctcgtcacctgctcttctcagaa
agcccagatcagagaggtcgaagctgtgggaagattaagaccctgttcctcaagcctcca
gggaagcgtggaccggggtggaccgtccaagctaaacttgatgtgtacttatggctggga
acttgcagagaatcgtcccacatgttgaacaatctcccatcaggctttgagctgggaggc
atctcatctgaggagagtacaggccatcctcctgagcatttactgtacacagagaagcat
atgttccagatgagggctcatatgtaccaggctcgtggtctcatcgcagcagacaacact
ggcctctcagacccctttgcctgggtgtcttttctgtccaatagccaaagcactggtatc
atcaagcaaacattgactccgacgtggaatcagctgatcctgataaataacgtgtctttg
tatggaggtcttcacgaaatagtccaggagccaccgctagttgtgattgaagtgtatgat
gatgatgcagtgggtatagagtacctggggtcgacagtggctgttcctgtagtcaaactc
gccgaggagggatacgtccctcctcagctgcagtacagtccattgttctgtggtggcctg
tcaggaggagacatactgggagcctttgaactcattcagatctcagagtcaggagaacac
actctccctgatttagatgagccagacggaggggttatccctgtaccttcatacattcgg
cctgttctctgcaagtacagaattgaggttttgttctggggcctcagagaactgaaaaaa
gttcagctcttatctgtcgatcgaccccaagtttttatcaagtgtgccggggcaggcctc
aactcctcagtgatacagagttacaagaaaaacccgaacttctcaatactcgtggatgcc
tttgatgtggagcttccggaagatgaacacctcctccctcctcttaccatcaccgtggtg
gactggagggcctttggacggagcacacttgtgggtagtcatgtgatcaacaacttggca
ttattcaaacacatccctttaccaatccaacagccccaacaggaggccagaaatatagca
gtggctcagctgtctctgcagcaaagtgttgtgccaccgccaaatgttgagatcgccata
gaaatagagcatgagcagataatcacccctaccccccaaaatgagccagacttcgaggac
aagaaggtgtcgaagaagagcaaacgaaggtctactaaaaggaagaaacgtaccacggct
gatgagtctgctgataacgtaattgattggtggtcaaaatactatgcatctatgcagaag
atccaacaggcaaagcaaaaagaaaacaatccatttccactgctctttgaaaatgtaatt
cctctggagaacattatttccgaaggattgatcaatctggcatcaggtcttaaggaaaag
aaaagggaggtgaattacaagagtgtgatagaacagcccaggcttgcaacgttacaggtg
tatgacaaagagctggaggcggagtttgggccttttgacgactgggtaaaaacctttgaa
ctctatcgaggaaaggccaatgaggaggacggctctgctgatgagagatttgtcgggaag
ttcaagggcaggttctgtctgtgcaaactgccagaaacggatgacgaggaggaggatgga
tatttggattctgggcagtttaaaataaaccagggtattcctgccaacactgcagtagag
gtcttgatccgtgtgtacatagttgcagccttcaacctgcacccagcggatccagatggc
aaagcagacccttatatagtgctaaaacttgggaaaactgagatcaaagacagagtcaat
tacatcccaaagcagctcaacccagtgtttggaagatcctttgaatttcaagccactttc
cccaaggaatccctgctaactattctcatctatgactatgacactgtcggtggggatgat
ttgattggagaaacacagatcgatttggagaaccgtttttacagcaggcatcgagctacc
tgcggtctgccttccgaatatgccattgagggttataatgcatggagggactgcatcaag
ccaacagacctgttgattaagctttgcaaggaaaacagactggacaaccctcacttttct
ccaggacacattaccataggaaacaaagtcttcacagggaaaacggtatttgctgatgaa
gatcagatggtggagtcgtacgagcatttggctctaaaggtgctacacaggtggtctgag
atgaccagtggggcctgtaaacttgtcccagagcatattgaaactcgtgcactctacctt
aaagacaaaccaggaatagaccagggccatctgcagatgtgggtggacatttttccaatg
gatatgcctcatcctggccctcctgtggatatttcccctcgcaaacccaaagggtatgaa
ctgagaatcattatctggaacactgaagatgtaatactagaggacaccaacttcataaca
ggacaacagtcaagtgacatttacgtcaaagggtggttaaagggtcttgaagatgacggc
caggaaactgatgtccattacaactctctgactggagaaggcaacttcaactggcgcttt
gtgttcccctttaactacctgccagctgagaaagtggtggtggtacaaaagcgagaaagc
atctactctctggacaaaactgaacagaagatccctgcagttcttgttatgcaggtgtgg
gactttgagaggctttcttctgatgacttcctgggctcagtggagttggacctgcatggg
tttccacatggagccaaatcagctaaagcttgtaagatggaaatgctgacagtaaccaca
gagaacatctctatctttcagcagaaacgctccaaaggctggtggcccttcattaaagct
ggcgaactcacaggaaaggtagaagcggaattccacctggtgacagctgaagaggcagag
aaaaatccagtggggcgtgcacgcaaagagccagagcctctagagaaaccaaatcgccca
gacacatccttctcctggtttatgaatcctttcaagtgcttctttcacctgatctggggg
aactacaagaaatacatcattgctggactggtgctgttgatcgtgactttgttcctggtt
ctcatcttctacaccctaccaggggcgatcagtagtaagattgtcaatgggtaa
DBGET
integrated database retrieval system
