Pimephales promelas (fathead minnow): 120487113
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Entry
120487113 CDS
T08155
Symbol
lrit1b
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1b
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120487113 (lrit1b)
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120487113 (lrit1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
ig
fn3
Ig_2
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
120487113
NCBI-ProteinID:
XP_039539262
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MFWGLALALCVLPSICGSCPAQCSCFYHKLSDGSKSRSVLCNGPDLTVIPNNFPSDTSKL
RIEKTSISRVASDTFLYLINLEYLWISFNSLSSLSADSFRGLYALDELRMDGNLLTSFPW
ECLTDMPSLRLLDLHNNKISSIPAEATIYIKNLTYLDLSSNSLATVPAEVLTSWFSLKPP
PDTENSKMILGLHDNPWQCDCRLFEMVQFQKFPSSSVALIDTGLRCAEPESLSGVLFSDA
ELRKCQVPRVHTAVARVRSSIGNNVLLRCGTIGVPIPELAWSRADGKPMNGTVQQEVSKE
GIIWSILSVPAVSYRDSGKYVCRATNFVGSADAIISLVISDTWQIDETVAKKSYGKKNGG
FGRAAYQEKLVARYVPPATSAAVPIIEPLNGPKNTQSIRVESYSVSDDAPKANATAAPAA
STEADSVEELQKDVLRNLEADVSSLQQVPERRVVRSVKVIGDTDHTVSLNWRAPTATNTT
SFSVLYAVFGERDMRRINVGPGKNRITIEGLVPKTKYIACVCVKGLIPKKEQCVIFSTDE
AASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKRLQKLLGRKAKDIQDSYVTFETL
SPGTKAKGMEGEYLSRLNPDESNRLLSARSSLDSAATARTEGQPNEYFC
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttttggggtttggcgctggcgctgtgtgttctcccctcgatctgcggctcctgtcct
gctcagtgcagctgcttctaccacaaactgagcgacggctccaagtcaaggagtgtcctg
tgtaatggccctgacctcactgtcatcccaaacaactttccctcggacacctccaaactg
cgcatcgagaagacgtccatcagccgtgtggccagcgatacctttctctacctcattaac
ctggagtacctctggatatccttcaactcgctctcctccctcagcgccgacagcttccga
ggactctatgccttggatgaactacggatggatgggaatcttctcacttcatttccatgg
gaatgtttgacggacatgcccagccttcggcttctggatttgcacaacaataaaatcagc
agcatcccagctgaggcaaccatttacatcaaaaacttgacctatctggatctgtccagc
aacagtcttgctaccgtcccggccgaggttctgacgtcatggttctctctgaaacctcct
ccagatacagagaattccaaaatgattctgggtcttcacgacaacccctggcagtgtgac
tgtcgtctgtttgagatggtgcagttccagaagtttccttcgtcctcggtggcgctgatc
gacacaggcctgcgctgtgccgagccggagagcctgtcaggagtcctcttctcggacgct
gagctccgcaagtgccaggttccccgcgtgcacacggccgtcgccagggtccgcagctcc
atcgggaacaacgtgcttctgcgctgcgggaccatcggagtgcccatcccggagcttgcc
tggtcccgggccgacggcaagcccatgaacggcaccgttcaacaggaagtctctaaagag
ggcatcatctggtccattctcagcgttcctgctgtttcctatcgagattcagggaaatat
gtttgcagagccacgaactttgtcgggagtgccgatgccatcatctcactcgtcatttct
gatacgtggcaaatcgacgaaacggtcgccaaaaaaagctacggaaagaagaatggtgga
tttggtcgtgcggcgtatcaagagaaactcgtggccagatacgtgcctcctgccacgtcg
gccgccgtgcccattattgagcctctaaatggaccaaaaaacacacagtctatccgggtc
gaaagctacagcgtttctgatgatgctcccaaagcgaacgccacggcggcaccggcagcc
agcacagaggccgacagtgtcgaggaacttcagaaagacgtgttgaggaaccttgaggcc
gatgtttcttctctacagcaggtccccgagcgccgagtcgttcggtcagtcaaagtgatc
ggcgacaccgaccacaccgtatccctgaactggcgagcgcccacagccaccaacaccacg
tcctttagcgttctgtacgccgtcttcggtgagcgagatatgcggcgcattaatgtcgga
cccggcaagaatcgcatcacgatcgaaggcctcgtgcccaaaaccaagtacatagcgtgt
gtgtgtgtgaaaggcctcatccctaagaaagagcagtgtgtgattttctccacggacgag
gcggccagtgccagcggcacacagaagctcattaacgtggtggtgatcactgtcgcctgc
gtcatcgcggttcctctgaccctgatcgtgtgctgtggggcgctgaagaagaggctgcag
aaactgctgggacgcaaggccaaagacattcaggattcctatgtgacgtttgagactctg
tctccaggcaccaaagctaaaggcatggagggggaatacctcagcagactgaacccggac
gagtccaaccgcctgctgtcagcccgctccagcctcgactcggcagccacggcccggacc
gagggacagcccaacgagtacttctgttga
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