Pimephales promelas (fathead minnow): 120487142
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Entry
120487142 CDS
T08155
Symbol
ttc21b
Name
(RefSeq) tetratricopeptide repeat protein 21B
KO
K19673
tetratricopeptide repeat protein 21B
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120487142 (ttc21b)
Cilium and associated proteins [BR:
pprm03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
120487142 (ttc21b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_2nd
ARM_TT21_C
ARM_TT21_N
ARM_TT21_5th
ARM_TT21
ARM_TT21_4th
TPR_19
TPR_14
TPR_2
TPR_16
TPR_1
TPR_8
ANAPC3
TPR_7
TPR_6
TPR_11
TPR_12
CFAP70_TPR_C
TPR_CcmH_CycH
CFAP70_mid_TPR
TPR_17
TPR_21
TPR_15
TPR_9
TPR_Slam
Wzy_C_2
TPR_Psidin_N
FAT
Tcf25
Motif
Other DBs
NCBI-GeneID:
120487142
NCBI-ProteinID:
XP_039539291
LinkDB
All DBs
Position
Unknown
AA seq
1318 aa
AA seq
DB search
MAGVDDEECTLALILYYCQEKYSCHVVDVSSEAQRKFSHDPIFTFLHAYGLIMQDQVLDA
IQELEQLKAKGDVSLCVLMALVYAHKKRPNPDRDVIQELDGRVKEERKTASPKALYYAGM
LLWLLGRNDKAREYVDRMIKISNGSKEGIVLKGWIDLRSDKDAKKSGKYFDEALKEKSDI
FALMGKVQYYEFRQNYSGALETINQVIVSYPSFLPALVKKMKLLLTLQDWEQTVDAAQRL
LQRDKNNLEALRMLALHSLCREGDIAESVNQLSNLISNLDIQELNNPELFYRMSLAFTRV
CGRAEKILQHTHRMVERAFTQASGDSELATEMGYQLVLLGRVKEAMKWYKTAMTLDESSV
PALMGIIRCQLMEGHLEDAEQQLEFLTEIQQSIGKSGELLYLRALLAVKKRRPPDEATNL
LNDTVDTHFSALQGLPLSVEYFEKLNPDFLLEIAKEYLALSPAKPPAPGQPPSPQLQHCA
SVLDTVLKVVPGLLQAGFLMAKVRFQSGDMEAAHSSLQHCLDQNPAHADAHLLMAQIHLM
QGNFKLSAQSLELCLSHNFEIREHPLYHLIKAQAQRKMGQLQEAIQTLQMAMSLCAVKRA
GSSAKRQSKRVELNSADCVSVFLELAEALWLNGEQHEAAKVMQDAINEFTGTPEELRVTI
ANADLALMRGDTELALSMLRNITPEQPYYVQAKEKMADIYLNHRKEKRLYVSCYRDLVDK
LPSPHTFLLLGDAYINIQEPELAIEVYEQALKKNPKDGAVASKIGKALVKTHNYVKAINY
YEAALKSGHQSFLRYDLADLLMKLRQYERCEKILQEALTHDPVNELLLLTEDCRYLVLLA
KVQSKVNKNDEALLSLQRARDVQAKVLKRVQMEQPDSVPAQKQLAAEICAEIAKHCSSQR
GYERAVKFYKEALVYCESDSKVMLELAQLYLTLDDVEACQQQCSAILKNDPVNESATLMM
ADLMFRKQDYEQAVFHFQQLLEKKPDNYPTLSRLIDLLRRAGKLEEVPRFLEMAEKHSSR
AKFEPGYNYCKGLYLWYTGEPNDGLRHFNKARKDNDWGQNAVYNMIEICLNPDNETIGGE
VFENLDGDMGNSTEKQESEQLAVRTAEKLLKELKPQTPAGHVQLRILENYCYLATKQKAN
VERALNVFIETANNEKDHVPALLAMATAYMILKQTPRARNQLKRIAKMNWNIIDADEFEK
SWLLLADIYIQSGKYDMAGELLKRCLRHNKSCCKAYEYMGYIMEKEQSFRDAAMNYELAW
KYSNQTNPTIGYKLAFNYLKAKRHVDAIDVCHKVLDAHPNYPRIRKDILDKARVALRS
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgttgatgatgaggagtgcacgcttgccttgatcttatactactgccaggaa
aaatactcctgtcatgttgtagatgtttccagtgaagctcaacggaaattcagtcatgat
ccaatcttcacattcctccatgcttatgggctgatcatgcaagatcaagtgttagatgct
attcaggagctggagcaactgaaggcaaaaggagacgtctctctctgtgtgctcatggct
ttggtttatgcccacaagaaaagaccaaaccctgaccgcgatgtcatccaggagttggat
ggaagggtgaaggaggagaggaagacggcgagtcctaaagctctgtattatgctggcatg
ctactgtggcttctgggtcgcaatgacaaagccagagagtatgtggacagaatgatcaag
atctccaatggctctaaagagggaattgttctgaaaggctggattgatctgcgatcggat
aaagatgctaagaagtctgggaaatactttgacgaggccctgaaggagaaaagtgatatc
tttgctctgatggggaaggtacaatattatgaatttcgtcagaattattctggtgcttta
gagaccattaaccaggtgatcgtgagttacccgtcctttctacctgccctggtcaagaag
atgaagctgctgttgactctacaggactgggaacaaaccgttgatgccgctcagaggctt
ctccaacgagataaaaataacctggaggctctgaggatgctggccctgcactctctctgc
agggaaggagacattgcagagtccgtaaaccaactatcaaatctgatcagtaatctggac
attcaagaactgaacaatccggagctcttctacaggatgtctttagcgttcactcgagtg
tgtggacgagctgagaagattcttcagcacactcacaggatggtggagcgggcgtttaca
caggcctcgggcgactctgagctggccacagagatgggttaccaactggttctgctggga
agggtgaaagaggccatgaaatggtacaagacagcgatgactctcgatgagagcagcgtc
cctgctttgatgggtatcatcaggtgtcagctcatggagggacacttagaggatgcagaa
cagcagctggagttcctcactgagatccagcagtccattggcaaatcaggggagttgctg
tatctgcgagcgctgttggctgtgaaaaagcgtcggcccccagacgaggcgaccaacttg
ttaaacgacacagtggacacacatttctccgccctgcagggtctgcctctcagcgtcgag
tactttgagaagctcaaccccgacttcctgctcgagatcgccaaggaatacttggcactg
tctccagccaagcctccagctccaggtcagcctccatcccctcagctgcagcactgcgcg
tctgtgctggacacagtgctgaaagtagtccctggtctgctgcaggccggctttctaatg
gccaaagtccgatttcagtcaggagacatggaggcggcccacagcagtctgcagcattgt
ttggatcagaacccggctcatgctgatgcccatctcctcatggctcagatacatctcatg
cagggcaacttcaagctctccgcccaatctctggaactctgcctcagccacaactttgag
atccgcgagcatccgctctatcacctgataaaggctcaggctcagaggaagatggggcag
cttcaggaggccattcagacgttgcagatggccatgagtctgtgcgctgtgaagagagca
ggctcttcagccaaaagacagagcaagagagttgagctcaactcggccgactgcgtatct
gtgttcctggaactagctgaggctctgtggctcaatggagaacagcacgaggcagctaaa
gtgatgcaagacgccattaatgagtttacgggcactccagaggagctacgagtcaccata
gccaatgcggaccttgctctaatgcgaggagatactgaactggcactgagcatgctcaga
aacatcacgccagagcagccatactatgtacaggccaaagaaaaaatggcagacatctac
ctgaaccacaggaaagagaaacggctttacgtgagctgctatagggatttggtggataaa
ttgccgagccctcataccttcctgttactcggtgatgcctacataaacattcaggagcca
gagctggctattgaagtatatgaacaggccttaaagaaaaaccccaaagatggagctgtg
gccagtaagattgggaaagcactcgtcaagacccacaactatgtaaaggcaattaactat
tacgaggcggcgctgaagagcgggcatcagagtttcctgcgttatgacctggccgatctg
ctcatgaagctcaggcagtacgaacgctgtgaaaaaatcctgcaagaggctctcacacat
gatcctgtgaatgagctgttgttacttaccgaagactgtcgttatcttgtgcttctcgcc
aaggttcagagcaaagtcaataaaaacgatgaagcgttactgtccctacagagagcgaga
gatgtgcaggcgaaggttctgaagcgtgttcagatggagcagcccgactcggtgcccgcg
cagaagcagctcgccgcggagatctgtgctgagatcgccaaacactgcagcagccagcgc
ggctacgagcgggccgtcaagttttacaaagaggcgcttgtgtactgtgaaagtgacagc
aaggtgatgctggagttggctcagctgtatcttaccctggatgatgtcgaggcctgtcaa
cagcagtgcagtgccattctgaagaacgatccggtcaacgagtccgccacgctgatgatg
gcagacctcatgttccggaagcaggactatgaacaggctgtatttcacttccagcagctc
ttggagaagaaaccagacaactacccaacgctgtcccgcctcattgatctgctgcgcaga
gccggcaaactggaggaggttccaagattccttgagatggcagagaaacactcatcgagg
gccaagtttgagccgggatacaactactgcaaagggctctacctgtggtacaccggtgaa
ccgaacgatgggttgcgtcactttaacaaagcccggaaggacaacgactggggccagaat
gcagtgtacaacatgattgagatttgcctcaaccctgacaatgagacgattggaggagag
gtgttcgagaacctggacggagacatggggaactctacagagaagcaggagtccgagcag
ctggccgtgagaacagcggagaagctcttgaaggagctgaagccacaaaccccagcggga
cacgttcagctgcgcatcctggagaactactgctatctggccaccaagcagaaagccaac
gtggagagagctctcaacgtcttcatcgagaccgcaaacaatgagaaagatcatgttcct
gcgctgctggccatggccactgcctacatgatcctgaagcaaacccctcgggcccggaat
cagctcaaacgcattgccaagatgaactggaacatcattgatgcggatgagtttgaaaag
agctggctgctcctggccgacatctacatccagtcggggaaatatgacatggccggagag
ctgctgaagaggtgcctacgccacaacaagtcctgctgcaaggcgtatgagtacatgggt
tacattatggagaaggagcagtcgttcagagatgctgccatgaattatgaattggcctgg
aagtacagcaatcaaaccaacccaactatcggctacaagcttgcgttcaattacctgaag
gccaaaagacatgtggatgctatagatgtgtgtcataaagttttggacgcgcatcccaac
tatccacggatcagaaaagacatcttggacaaagcaagagtggctttaagatcatga
DBGET
integrated database retrieval system
