Pimephales promelas (fathead minnow): 120487150
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Entry
120487150 CDS
T08155
Symbol
tspearb
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X1
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120487150 (tspearb)
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120487150 (tspearb)
Cilium and associated proteins [BR:
pprm03037
]
Other cilia and associated proteins
Stereociliary proteins
120487150 (tspearb)
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
120487150 (tspearb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_1
Laminin_G_3
TS_C
DNA_mis_repair
Motif
Other DBs
NCBI-GeneID:
120487150
NCBI-ProteinID:
XP_039539301
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MSELLLLACALLSWIITCQSGPWRPCTDLLQLDLLSRVLPGTSTAQDGIHMVQSRGSRGF
QFSGSPQLFSFPASQLFINCNFFPAEFSIVVTLKIPQMAPEKSEYIFTLLDGDSDELLLG
LRLSQNNLHFLQKGHGPKKRTTFKAVALDDNRWHTVVLAVTGHYTILTVDCGRPLELALE
SPFSDDLDTTGSTFFIASRRRWNGLFSGLIRQLVLLPGSDATSRICPSSEPRLSALSVPQ
ALLHLPIKPSSIDLPLHPYEAEVRVTAGVSPPCGHSEEGQLWFSTLKKGLFLCDGIMWLT
MLQVKEKLDYVEDHQDLFTSSETFDIEVFHIPSVGLFMATANRDSNLGSGIYKWTDGKFE
RYQNISTYDAQAWQYFTVGKKKFLVVANCRGKDAGDQEQSVIYKWSSRKLKFIHYQTLNT
HSARDWEAFNIQDETFLAVANHRQGERNHNINSVIYKWDPVTQYFEVNQTIPTAGAYDWE
FFSIGPYYFLVVANTFNGRSTVIDSTIYIWLGQMFQPYQSITTFGAIDWEMFQIENRVFL
AVANSQMLTEDGKIQYSINSTIYELSMASQTFIKFQDMETNSALDWEYFTVGDDKFLVVA
NSYDGTSYSLNSVIYRWQGYEGFVPVHRLRTNGCRDWEFFNTTDGSYLIYSSARAALSKV
LKLRTI
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagctgctgctgctggcctgtgcgctcctctcctggatcatcacctgccagtct
ggaccatggagaccatgcacagatctgttacaactggacttgctgtctcgggtgcttcct
gggaccagcacggcgcaagacgggatacatatggtccagtccagaggctctcgaggattc
cagttttctggatctccgcagctgttcagtttccctgcatctcagctcttcattaattgt
aacttctttcctgccgagttctccatcgttgtcacactgaaaatcccacaaatggctcct
gagaagagcgaatacatcttcacactgttggacggagattcagatgagctgctcctcggc
ctgcgactttcccaaaacaatcttcacttcctgcagaagggccatggtcccaagaagcgc
accactttcaaggcagtagcactggatgataaccgttggcacactgtggtcttggcagtg
acgggacactacacaattctcactgtagactgcggcagacccctcgagctagcgcttgaa
agccccttcagcgatgatctcgatacaactggttccacattcttcattgctagcagaagg
agatggaatggcttattttctggtctgattcggcagcttgttctcttacctggttcagat
gcaacctcacgaatatgtccctcatctgagccccggctgtctgcactctctgttcctcag
gctctcttacacctgccaatcaaaccatcatccattgaccttccccttcacccttatgag
gcagaggttcgagtgactgcgggtgtgagtcctccctgtggacactctgaggagggacag
ctgtggttcagcacactgaagaaaggactgtttctctgtgatggcattatgtggctcact
atgctgcaagtgaaagagaagctggattacgtggaggatcaccaggatttattcaccagt
tctgagacatttgacatcgaagttttccacatcccttctgtagggcttttcatggcgacc
gccaaccgtgattccaacctcggttcaggaatatacaaatggacagatgggaagtttgaa
cgatatcaaaacatcagcacttacgatgcacaagcatggcaatacttcacagtgggcaaa
aagaagttcctggttgttgctaactgcagaggtaaggacgcaggggaccaggagcagtcg
gtcatatataaatggagctcaaggaagctgaaattcattcactatcagactctgaacaca
cacagcgcacgtgactgggaggctttcaacattcaggacgaaactttcctcgccgtcgcc
aatcataggcaaggggagagaaaccataatattaacagtgtaatctacaagtgggaccca
gttacccagtattttgaggtcaatcagacaatcccgaccgccggtgcttatgattgggag
tttttctccatcggcccatattacttcctcgtagtcgcaaatactttcaatggaagatca
acagtcattgattctacaatctatatctggctgggacagatgtttcagccttatcagtcc
attacaacatttggggctatagactgggagatgttccagattgaaaacagggtgttcctg
gctgtagccaacagtcagatgctaacggaagatggcaagattcagtactccatcaactcc
accatctatgagctcagcatggcatctcagacgttcatcaagtttcaggatatggaaacg
aacagtgctttggactgggagtatttcactgtgggagatgataagttcctggtggtcgcc
aactcctatgatggaacctcatactcccttaacagtgttatatacaggtggcagggttat
gagggctttgtccctgtgcacagactccgcaccaatggctgcagagactgggaatttttt
aacacaaccgatggctcctacctcatctactccagtgctagagctgctctctctaaagtc
cttaaattaaggaccatatag
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integrated database retrieval system
