Pimephales promelas (fathead minnow): 120487326
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Entry
120487326 CDS
T08155
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120487326 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120487326 (u2af1)
Spliceosome [BR:
pprm03041
]
Complex A
U2 snRNP components
U2 related factors
120487326 (u2af1)
Complex B
120487326 (u2af1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
120487326
NCBI-ProteinID:
XP_039539574
LinkDB
All DBs
Position
Unknown
AA seq
239 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ
SADGINAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREE
DAEKAVINLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL
RRELYGRRRKRHRSRSRSRERRSRSRERNRGGGGGGGGGGGGRDRERRRSRDRERSGRF
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatacttggcgtcgattttcggtacagaaaaagacaaggtcaactgctctttc
tactttaaaattggagcatgtcgccatggagaccgatgttctagactccataacaaaccc
acgttcagccagaccattgctctgttgaacatataccggaacccacaaaacacagctcag
tctgctgatggcataaatgctgttagcgatgtggagatgcaggaacattatgatgagttc
tttgaggaggtcttcactgaaatggaggagaaatatggagaggttgaggagatgaacgtg
tgtgataatttaggggatcacctggtgggaaatgtctatgtgaagttccgccgtgaggaa
gatgcagagaaagcggtgattaacttgaataaccgctggtttaatggacagcccattcat
gctgagctctcgcctgtcaccgatttcagagaggcctgctgtcgacagtatgaaatggga
gagtgcactcgaggtggcttctgcaatttcatgcacctaaagccgatctcaagagaactc
cgaagagaactgtatggccgcagaaggaagaggcatcgctcccgctcacgttcccgtgaa
cgccgttctcgttctagggaacgcaatagaggtggaggtggaggtggtggaggtggaggt
ggaggaagagacagagagagacggcggtcaagagatcgagaacgctctggacgattttaa
DBGET
integrated database retrieval system
