Pimephales promelas (fathead minnow): 120487535
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Entry
120487535 CDS
T08155
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120487535 (vps52)
Membrane trafficking [BR:
pprm04131
]
Protein recycling
Others
EARP complex
120487535 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
120487535 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
CoV_NSP7
MscS_porin
DUF4795
DUF5740
DUF7491
Nup49_C
DUF1664
Motif
Other DBs
NCBI-GeneID:
120487535
NCBI-ProteinID:
XP_039539670
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MAEALIAGAVHTNTPAESMSGAMEYLQDKKSDFDVVPPLNLGDLDITTDEFILDEVDLHI
QANLEDDLVKEALKTGVDLRQYSKQVETELQRIEQASIKDYIKESQNIASLHNQITACDS
ILERMEGMLSSFQSDLSSISSEIQTLQQQSVSMNMRLKNRQAVRSQLSQLVDELVVPSTM
ISVIIDSPVTEQEFLEQLHELNNKINFAKELSFRETLACSDIQDIVDRLKIKAVSKIREF
ILQKIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYFSYFK
SYSSRLLKVQYEDVADKDDLMGEEDTAKKGFFSKPSFKSRNTIFTLGQRGEVLNPTELEG
PILIPHTAQRGESRYPYETLFRNQHYALLDNGCREFLFLSDFFMVAGNSALDLFNSIMGK
TLSMFLKNLSTYLTDCYDSIAVFLCIHIILRFRAITAKRNIPALDKYWEAVLELLWPRFE
LILEMNIQSIRNTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFPNERTNTLLGQLQI
EVENFVLKMAAEFPSRRDQLIFLINNYDMMLNVLMERAADDSKEVEGFQQLLLARTQEFI
EEILSSPFGGMIAFVKESEGLIEKGQLDKLKNDEARITQLVRGFSSTWKQSVEALSQDVM
RSFTNFKNGTSIIQGALTQLIQYYHGFHKVLSQPTFRSLAVRSELINLHHLMVEVKKHKP
NF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgctgatagctggagctgttcatacaaacacgcccgctgagtccatgagc
ggtgcgatggagtatttacaggataagaagtcagactttgatgtggttcctccactaaat
ttgggtgatctggacatcactacagatgagttcattctggatgaggtggaccttcacatt
caagctaatctggaggatgatctggtgaaagaggcgctcaagacgggtgtggatctgcgg
cagtactccaaacaggtggagaccgagctgcaacgaattgaacaagcatcaatcaaagac
tatatcaaagagagtcagaatattgcctctttacacaaccagatcacagcctgtgactca
atactggagcgtatggaaggcatgttgagtagttttcagagtgacctgtcatccatcagc
agtgagattcagacactgcagcagcagtcagtcagtatgaacatgaggctgaaaaaccgc
caggctgtccgcagtcagctcagccagctggttgatgaactggtcgttcccagcaccatg
atttctgtgattatagacagtcctgttacggagcaggagtttttggagcagcttcacgag
cttaacaacaagatcaattttgctaaagagctcagcttcagagagacccttgcctgctct
gatatacaggatatcgttgatcgcctcaaaattaaagccgtctcaaagatccgtgagttc
atcctacagaagatctactcattcagaaagcccatgaccaactaccagatccctcagaac
acactactcaagtatagatttttctatcagttcctgttagccaatgagaggaccgttgca
aaggagatccgggacgagtatgtggacaccatgagtaaaatctacttcagttacttcaag
tcatacagcagcagactactgaaagtccagtatgaagacgttgcagacaaggatgatctg
atgggagaagaggatacagccaaaaaaggttttttctccaagccttctttcaagagtagg
aacactatttttactcttggccagaggggggaagtactgaaccctacagagctggagggg
cccatactcatcccacacactgctcagagaggagagtccagatacccgtatgaaactctc
ttccgcaatcagcactatgctttgttggataacggctgtcgagagttcctcttcttatcg
gacttcttcatggtggctggaaattctgctttggatttgttcaacagcatcatgggaaaa
acgctcagcatgttcttgaagaatctgtcaacatacttgacagactgttatgacagtatt
gctgtgtttctctgcattcacatcattctgcgcttcagagccatcacagccaagaggaac
atccctgcacttgacaagtactgggaggctgtgctagaattgttatggccaagatttgag
ctcattttggagatgaacatccagagcattcgaaacactgaccctcagaaactgggtgta
ctggacaccagaccacactatattacacgccggtatgctgaattctcttctgctattgtt
agcataaatcaaacctttcccaatgagaggaccaacacgctactcggacagctgcagatt
gaagtggagaattttgtgctgaaaatggcggccgagtttccttctagacgagaccagctc
atcttcctcatcaacaactatgacatgatgctcaatgtgctcatggagagagcagctgat
gacagtaaagaggttgaaggctttcagcagctcctactggcgagaacacaggagtttata
gaggagattctttcatctccgtttggagggatgattgcatttgtgaaggagagcgaggga
ctaatcgagaaagggcaacttgacaaactcaaaaatgatgaagctcgtatcactcagttg
gtgcggggtttctccagcacatggaagcagtctgtggaggccttgagtcaggatgtgatg
cgttccttcaccaactttaaaaacggaaccagcataattcagggagcgctgacccagctc
atccagtactatcatggtttccataaggtcctctcccagccaacattccggagtctggcg
gtgcgctctgagctcataaacctccatcatctgatggttgaagtcaagaaacacaaacca
aacttttga
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integrated database retrieval system
