Pimephales promelas (fathead minnow): 120487571
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Entry
120487571 CDS
T08155
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120487571 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120487571 (exosc5)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120487571 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120487571
NCBI-ProteinID:
XP_039539715
LinkDB
All DBs
Position
Unknown
AA seq
230 aa
AA seq
DB search
MRATSGLCVRTMMELDQSCSVLREYGSEQSLLSRPDGSSTFVQGDTSILAGVYGPAEVKV
SKEIYDRATVEVLIQPKMGLPSVRERAREQCVRETCEAALLLTLHPRSSLTVILQVVHDD
GSLLSCCLNAACMALMDAGLPMSLLFCGVTCAISKEGQIITDPSAQQEKESRALLTFAID
SVERSVLMASTSGSFSVHELQQCIAVSQKASEQIFQFYRDSVKRRYSKIQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgacgagcggattgtgcgtgaggaccatgatggagttggatcaaagttgttca
gttttaagggaatatggaagtgagcagagtttgttatcaagacctgacggctcttctact
tttgttcaaggggatactagtattctggctggagtttatggaccagctgaggttaaagtc
agcaaggaaatctatgatcgtgcgactgtagaggttctcatccagccaaaaatggggctt
ccaagtgtccgcgagcgggcacgagagcagtgtgtgcgcgagacctgcgaggcggctctt
ctgttgacgcttcatcctcgctcttctctcactgtcatcctgcaggtcgtccacgatgat
ggctctctgctgtcgtgctgcctgaacgccgcctgtatggctctaatggatgcagggctt
cccatgagcctcctgttttgtggcgtgacctgcgctattagcaaagagggccagataatc
acagacccctcggctcagcaggagaaggaaagtcgagcgttgttaacatttgccattgat
agcgttgagcgcagtgttttgatggcatcaacttcaggctcgttttcagtccacgagctg
cagcagtgcatcgcagtcagtcaaaaggcttctgaacagatcttccagttttatagggat
tctgtcaaacggcgatattcaaaaatacaataa
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integrated database retrieval system