Pimephales promelas (fathead minnow): 120487575
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Entry
120487575 CDS
T08155
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120487575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120487575
03036 Chromosome and associated proteins [BR:
pprm03036
]
120487575
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120487575
Coactivators
SAGA/TFTC/STAGA complex
120487575
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120487575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
120487575
NCBI-ProteinID:
XP_039539724
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLGGQRDATRAQPENARPGSARQQQQQAGG
RAHVDSPSEPQQQTQQQNARKAARNPDSDPKDASMEKHPKALEKESPLKSHGSIIIITTA
AASDGGSAPAPGNKGESPRDTRKKHPNARARRASASHSLNGAASASASPSTSSPTITVAS
NPQAIALDRGTPTIALHRLPRHIIASIAQNGNGTSVSALVQQGARIGAAGAQVNHTKAPG
INAKAASPPAAPAATPVKPAVSVSSTPAARPAQTPAQQRLVTPQLIVRPPQQQTTIQLPP
GFTIPPGMVLVRTEMGQLVMVPQQALAQAQAQNSISPRPSTPTSTATFRVTTPQSPVSTQ
AIRPAPAAQTKPVQSSSPAQTSTATGPTKGPVAAGVAVTAPQQVQPAPGPQGSLTQMPLA
PQSAVAPAPGAPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAK
IDPEEFTSRLQSELKSSPQPYLVPFLKKSLPALRLSLLNSQHSLAQPLQPNKSSVTPVQT
SVCVRPHQPNSTAVLPQGIKRAAGPGGQIRMPVVITQTVRTTGTLGKPAGLQMGKSPVGV
SVQLSGNQRNRLTDPGGGSYRDDDDINDVASMAGVNLNEESARILATNSELVGTQIRSCK
DEAFLPTGLLHRRILETAKKFGVTDVPLEAVSFISHATQSRLRTVLEKVSFIAQNRMDSC
KEGEGYEQSSDVRSQLRFFEQLERMEKQRKDEREREILLRAAKSRSRQEDPEQARLKQKA
KEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGATTTGIEVSGSSAGSPAGSSASSG
SSRQYSRQRITRVNLRDFIFYMEQERETSRSLLLYRALLK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagacatgctcttctccgaggtggacgagaaagcc
gtgagcgatctagtgggctcgctggagtctcagctggggggtcaacgcgacgcgacgcgc
gcgcagcccgagaacgcgcgcccgggcagcgcgaggcagcagcagcagcaagcaggagga
agagctcatgtagactctccatcagaaccacaacaacaaacacagcagcagaacgcgagg
aaagcggcgcgcaacccggattcagacccgaaagacgccagcatggagaagcaccccaaa
gccctggagaaggagagtcctctgaagtctcacggcagcatcatcatcatcactacggct
gcagcctccgacgggggatccgctcctgcaccgggcaacaaaggtgagagcccgagggac
acccgcaagaaacacccgaacgcgcgcgcacgacgcgcctcagcgtcccacagtctcaac
ggcgcagcatcagcatcagcatcacccagcacctccagcccgactatcaccgtggccagt
aacccgcaagcgatcgcgctggaccgcgggacgcccaccatcgcgctgcaccgactcccg
cggcacattatcgccagcatcgcgcagaatggaaacggcacgtcggtgtccgcgctggtc
cagcagggcgcgcggattggagcggcgggcgcgcaggtgaaccacaccaaagcacccggg
atcaacgcgaaagccgcgtcgcctcccgccgcgcccgcagcaacgcctgtcaaacccgct
gtcagtgtcagctcgaccccggccgccagacccgcgcagacgcctgcgcaacagaggctc
gtaacgccgcagctgatcgtcagaccaccgcaacaacaaactaccattcagctgccaccc
ggattcaccatcccgccaggtatggtgctggtccgcacagagatgggtcagctggtgatg
gttcctcaacaggctctggctcaagctcaggctcagaacagcatctcaccgagaccctcc
acacccaccagcactgccaccttcagggtcacgaccccacagtctcctgtcagcactcag
gcgattcgtcccgctcccgcggctcaaactaaaccggtccagtccagttcaccggcccag
accagcaccgccaccggccccactaagggccccgtggcagccggcgtggcggtgacagct
ccccagcaggtccagccggccccgggcccccaggggtccctcactcagatgccactggcc
cctcagagcgcagtcgccccggcccccggagccccggtcgtctcccaggagatgcaggag
aacgtgaagaagtgcaagaacttcttggcgacactcatcaagttggcatcccataattct
ccttccccggagacgtctcgaaacgtgaaggcgctggtgcaggatctgctggatgcaaag
atcgacccggaggagttcaccagccggctacagtccgagctcaagtcgtctccgcagcct
tacctggtccctttcctgaagaaaagtctccctgcgttgcgcctgtctctcctgaacagc
cagcactctctcgcacaacctctccagcccaacaagagcagcgtgacgccggtccagacg
agtgtgtgtgtccgtccgcaccagcccaacagcaccgccgtcctgccgcaaggtataaag
agggcggcgggtcctggtggtcagatacggatgcctgtggtcatcacacagacggtgcga
acgacaggtactttagggaagcctgcaggtctccagatgggcaagagcccagtgggcgtc
agcgttcagctctcaggaaaccagaggaaccggctgacggacccagggggcggctcgtac
agagacgatgatgacatcaatgatgtggcgtctatggccggcgtgaacctcaacgaagag
agcgctcgtattctagcgaccaactctgagctggtgggaacgcagatccgctcctgtaaa
gacgaggcgttcctgccgacgggtctgttacaccggcggatactggaaacagctaagaag
tttggagtgacggacgtcccgctggaggctgtgagcttcatttctcacgccacccagtcc
agattacggacggtgctggagaaagtttccttcatcgcccagaacagaatggactcttgt
aaggaaggcgaggggtacgagcagtcgtctgatgtgcgctcgcagctcaggttttttgag
cagctggaacggatggagaagcagaggaaagatgagcgagagcgagagattctcctccga
gcagcgaagagtcgctcgcggcaagaagatccagaacaagcccgtctgaagcagaaagca
aaggagatgcagcaacaggaactcgcccaaatgagacaacgagacgccaatctaacggca
ctcgccgccatcggccctcggaagaagcgcaaagtggactcgccaggagccacgaccaca
ggcatcgaggtgtcggggagttcggcgggttctccggccggatcgtcggcctcctccggc
tcgtcacgacagtattcccgacagagaatcacacgtgtcaatctcagggacttcatcttc
tacatggagcaggagcgagagaccagcagatctctccttctgtatcgagctctcctgaag
tag
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integrated database retrieval system
