Pimephales promelas (fathead minnow): 120487655
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Entry
120487655 CDS
T08155
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120487655 (ctcf)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120487655 (ctcf)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120487655 (ctcf)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120487655 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_ZN142
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
120487655
NCBI-ProteinID:
XP_039539851
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MKCSFLMQVDISLSECVYVLPMEGGPTEAVVEDAGDAFKAKECKTYQRRREDEEVGAELL
QAAGLEQVQIEGQPVVEAQQQLVESVVNVNSSVEMMVMDTLDPALLQMKTEVMEAAVGAP
VGVAGAAHEATVTTVDDTQIITLQVVNMEEQQLGLGELQLVQVPVSAVPVTAATVEELQG
TLVDATAMPKDGEPVICHTLPLPEGFQVVKVGANGEVETVEQDELQAQEDQPQQQEEEEM
AEAQNEDPAWSKDPDYTPPVKKAKKTKKSKLRYNTEGDKDMDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGRKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSQCEKTFRQKQLLDM
HFRRYHDPNFVPTSFVCTKCGKTFTRRNTMARHAENCTGVDSADGENGTPPKRARGGRKR
KMRSRKDDDDDDSDEHGEPDLDDIDEEEEDDLLDDEQMDVEQAPPSVPMPAPAEPPVKRK
RGRPPKNAPKPSPTKSIAKTTTAAAAIIQVEDESTGAIENIIVKKEPEGSDATVTAQPVV
EEVEAVEAGVETVQIAVPEAAPNGDLTPEMILSMMDR
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgttcctttttgatgcaggttgatatcagcctgtctgagtgtgtgtatgtatta
cccatggaagggggaccgactgaggcggtggtggaggatgcaggggatgcttttaaggcc
aaggaatgcaaaacctaccaaaggcggcgagaagatgaggaagtgggagctgaattgctg
caggctgctggattagagcaagtccagattgaaggacagcctgtggtggaggcccagcaa
cagttggtcgagagtgtagttaatgtcaacagcagtgtggagatgatggtgatggacacc
ctggaccctgccctactccagatgaagactgaagtcatggaggctgctgttggagcacct
gttggtgtggctggtgctgcccatgaagccacagtcacaactgtcgatgacactcagatc
atcaccctgcaggtggtgaacatggaggagcagcagttgggcttgggagagcttcagcta
gtgcaggtgccggtttctgctgtcccggtcactgctgccactgtggaagagctgcaaggg
acactggttgatgccactgccatgcctaaagacggggagcctgtcatctgtcacaccctg
ccattgcctgagggcttccaggtggtcaaggtgggtgcaaatggagaagtggaaactgtg
gagcaagacgagctccaggcccaagaggatcagcctcaacagcaggaggaagaggaaatg
gctgaagcccaaaatgaagaccccgcgtggtccaaagatccagattacacgccccctgtt
aaaaaggctaagaagaccaagaaaagcaagctgcgctacaacacggagggggataaagac
atggacgtgtctgtgtatgactttgaggaggagcaacaggagggactgctttctgaagtc
aatgctgagaaagttgtgggtaatatgaaaccacctaaaccaaccaaaatcaagaagaaa
ggtgttaagaagacattccagtgtgagctgtgcagttacacctgccctcgccgttccaat
ctggatcgccacatgaagagccacactgatgagaggcctcacaagtgccatctttgtgga
cgagccttcagaactgtgacattgctgaggaaccatctaaacactcacacaggcactaga
ccacataagtgcactgactgtgacatggccttcgtcaccagtggagagctggtgcgacac
agacgctacaagcacactcatgagaaaccattcaagtgctccatgtgtgactacgctagt
gtagaggtcagcaagctgaagcggcacattcgctcccacactggagaacgtcccttccag
tgcagtctgtgcagctatgccagcagagatacctataagctgaaaagacatatgaggacc
cactcaggagagaagccctatgagtgctatatctgtcatgcacgttttacccagagtggt
accatgaagatgcacattctgcagaagcacacagaaaatgtggctaaatttcactgccct
cattgtgacacggttattgctcgcaagagcgatcttggtgtgcacttacgtaagcagcat
tcctacattgagcagggcaggaaatgtcgttactgtgatgcggttttccatgagcgctat
gctctcatccagcatcagaagtcccacaaaaatgagaagcgcttcaagtgtgaccagtgt
gactacgcatgccgtcaggagcgccacatggtaatgcacaagcgcacccatactggggag
aagccatacgcctgcagccaatgtgagaagactttcagacagaaacagctcctggatatg
cactttcggcgctatcatgatcccaactttgtgcccacatcctttgtttgcaccaagtgt
ggcaagaccttcactcgcaggaataccatggccagacatgcagagaactgcactggtgtg
gattctgctgatggagagaacggtactccacccaaaagggctcgtggtggccgaaagagg
aagatgcgctctagaaaggacgatgacgacgatgatagcgatgagcatggagaacctgac
cttgatgacattgatgaagaggaagaggatgatcttcttgacgatgaacagatggatgtg
gaacaggctccacccagtgttcccatgcctgcaccagctgaacctcccgttaagaggaaa
cggggcagaccccccaagaatgcacccaagccctcacctacaaaatctatcgccaaaacc
accacagcagctgctgccattatccaggtggaggatgaaagcacaggggccattgagaac
atcattgtgaagaaggagcccgagggctctgatgctactgtaactgcccagccagtggtg
gaggaagtggaggcagtcgaggctggtgttgaaacagtgcagatagctgtccctgaagct
gcacctaacggtgatcttactcctgaaatgatccttagcatgatggaccgatga
DBGET
integrated database retrieval system
