Pimephales promelas (fathead minnow): 120487677 Help Entry 120487677         CDS       T08155                                  Symbol ighmbp2 Name (RefSeq) DNA-binding protein SMUBP-2   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism pprm  Pimephales promelas (fathead minnow) Brite KEGG Orthology (KO) [BR:pprm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:pprm03009]     120487677 (ighmbp2)    03012 Translation factors [BR:pprm03012]     120487677 (ighmbp2) Enzymes [BR:pprm01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      120487677 (ighmbp2)     5.6.2.5  RNA 5'-3' helicase      120487677 (ighmbp2) Ribosome biogenesis [BR:pprm03009]  Eukaryotic type   Other ribosome biogenesis factors    120487677 (ighmbp2) Translation factors [BR:pprm03012]  Eukaryotic type   Initiation factors    Initiation associated factors     120487677 (ighmbp2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_19 AAA_30 zf-AN1 DEAD Viral_helicase1 UvrD-helicase ResIII nSTAND3 AAA_22 Flavi_DEAD PhoH AAA_16 T2SSE Helicase_RecD SRP54 NPHP3_N Herpes_ori_bp IstB_IS21 AAA_7 Zot AAA AAA_25 ABC_tran AAA_33 UvrD_C_2 Motif Other DBs NCBI-GeneID:  120487677 NCBI-ProteinID:  XP_039539885 LinkDB All DBs Position Unknown AA seq 1001 aa AA seqDB search MEVENFVSKTLELLQEEREAELEETRAWQENLSPKNLQHKGVFLMKLQIGSQHTGMYGRR LVVFEPRKCIGPSVLPSNTFGPGDIIGLYQSEGQSQPSELGSGVVTRVTQASLTVAFDDT QDSLNLDRDGLYNLMKLANNVTYRRLSKALKSLNGYSSGPASYLISVLFGYSEPGILSHQ HVLEFSNTGLDNSQKEAVSFAMSQKDVAIIHGPPGTGKTTTVVEVILQAVKQEQKILCCA PSNVAVDNLVERLVKSKVKVLRLGHPARLLESIQKHSLDAVLAHSDNTNIISDIRKDMDK AFNEMKKARDKGQRSNLKREIGELRRELRTREETAITQILKRADVILATNTGASDEGPLK HLPKDHFDLVVIDECAQALESSCWIALLKARKCILAGDYKQLPPTIKSQSAASKGLSVSL MERLIKKYGDSVVRMLTTQYRMNSAIMQWASEQMYQGKLFAHPSVEKHLLRDLAGVADVE ETRIPLLLIDTAGCGLNEMEDTDEQSKGNQGEVDIVALHIKALTEAGVHVKDIAVIAPYN LQVDLLRQKLSHKYTELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVT RARRQLAVVCDTQTVRNHDFLKSLVDYMSEHGELHTAFEYLEDCVPQNYIRDEKDKQTNA KDSISVKQKPKNQGKKSEQEYKKSGNNKSSEASQSSVQTDQHKNTNSLHSKPKDVNQTQN KRKEIKDQLLTFLTDPNKTELQFPSTLNSHERLLVHELSEEMGLRHESQGEGKNRRITVS RPPSGPEKPVKEPEQPDVTECTAEKVQEESQKASSQAAIDLKSLHLERMRREQEKREEKK QQKQQSMRLEPDCNASKKQSVKKPKATSKGSTKIKAGAVDIAAAATADDDFDSLIDSVVK ADSVCAFVKCKASVLTLGQLCLYCKRQYCLSHHIPEVHGCGDKAKAQARMRISKEGVLYA GSGQKDKSMDPNKKAYLQRKLDSKLKDMSSQRKTKVKDKEN NT seq 3006 nt NT seq  +upstreamnt  +downstreamnt atggaggttgaaaacttcgtttccaagaccctcgagctcctgcaagaagagagagaggct gaattagaagaaacacgagcatggcaggagaatttatctcccaagaatctacagcacaaa ggagtgtttctgatgaaacttcagatcggaagccaacatactggcatgtatggcagacgt ctagtagtttttgaacctaggaaatgtattggaccctcagttcttcccagcaataccttt ggacctggtgatattataggtttgtatcagtcagagggtcagagtcagccatctgaattg ggctctggcgtggtaacacgtgttacccaggcgtccctgacggtggcttttgatgataca caggacagtttaaacttggacagagatggactctacaatctaatgaagctggcaaataat gtgacctatagacgactgtcaaaggcattaaagtctttaaatggatacagcagtggtcct gcatcttacctgatcagtgtactctttggttactcagaaccagggatattatcacatcaa catgttttggaatttagcaacactggattagataattctcagaaagaggctgtgtccttt gcaatgtctcagaaagatgttgcaatcatacatggaccaccagggactggcaagaccact acagtggttgaagtaatcctgcaggctgtaaaacaagaacaaaagatcctttgctgtgca ccttccaatgtggctgttgacaacctggtggagcgccttgtgaagagcaaggtcaaggtt ttaagattgggtcacccagcccgtctgctcgagtcgattcagaagcactcattggatgcg gtccttgcgcacagtgacaacaccaacatcatttctgatatccgcaaggacatggacaaa gcttttaatgaaatgaagaaggctcgggacaaaggccaacgtagcaatctgaaacgggaa atcggggaactgcggcgagagctgaggaccagggaggaaacggctatcactcagatcctg aaaagagctgatgttattctagcaactaacactggagcctctgacgaaggtcctctcaaa catcttcctaaagatcattttgacctggtggtgatagatgagtgtgctcaggctctagag agcagctgttggatcgctctgctcaaagcacgcaaatgcatactggctggggattacaaa cagctgccacccacgatcaaatcacagagtgctgcatctaaaggcctgtctgtcagccta atggagaggctaataaagaaatatggagactctgtggttcgaatgctgaccactcagtac cggatgaacagtgccatcatgcagtgggcttcagagcagatgtatcagggaaagctgttt gcacacccttcagtggagaaacacttgctcagagacctggctggtgttgctgatgttgag gaaaccagaattccccttctgcttattgacactgcaggctgtggcctgaatgagatggag gacacagatgagcagtctaaaggcaatcaaggagaagtagacattgtggcacttcatatc aaagctcttactgaggctggagttcacgtcaaagacattgcagttattgcgccctataat ctccaggtggatcttttgagacagaaactgtcccataaatatacagagttggagatcaag tctgttgatggttttcagggcagagagaaggaggcagtggtgttgtcattggtcagatcc aacaggaagggtgaggttggatttctcgctgaagacagaaggatcaatgttgctgtgacg cgtgccagacgtcagctcgcggtagtgtgtgatactcagactgttcgaaaccatgatttc ctgaaatccttagtggactatatgtctgaacatggagaattacacactgccttcgagtac ctggaagactgtgtgccacagaattacatccgtgatgaaaaggacaaacagaccaacgcc aaagactctatatccgtaaaacagaagcccaagaaccaaggcaagaaatcagagcaggaa tacaagaaaagtggaaacaataaaagcagtgaagcgagtcagtccagtgttcagacagat caacataaaaacacaaattcacttcactctaaacccaaagacgtcaatcaaacacaaaac aagagaaaggagataaaggatcagcttctgacctttttgacagacccaaacaagacagaa ctacagtttccttccacgctaaattcccacgagcgtctactggtccatgagctctctgaa gaaatgggattgaggcatgaaagccagggagaagggaaaaaccgtcgcataactgtgtcc cggcctccatcaggaccagagaagccagtgaaggagcctgaacagccagacgtgaccgaa tgtacagcagaaaaggtacaagaagaatcacaaaaagcttcttcacaggcagctattgat ttgaaaagcctacatttggagcgaatgcgccgggagcaggagaaacgagaggagaaaaaa cagcaaaaacagcagagcatgagactggaaccagattgcaatgcgagtaaaaaacagtct gttaagaaacccaaagcaacttccaaaggaagcactaagataaaagcaggagccgtggat atagctgcagctgccacagctgatgatgattttgactctctgatcgattctgtggttaaa gctgacagcgtgtgtgcatttgtgaagtgcaaagccagcgtcctaacactagggcagctc tgcctctactgtaaaaggcaatactgtcttagtcatcatatacctgaggttcacggatgt ggagacaaagcgaaagctcaggctagaatgaggataagtaaagaaggggtgctctacgca ggaagtggacagaaggacaaatcaatggatccaaataaaaaagcatatctgcagagaaaa ctagactctaaactgaaagatatgtcatctcaaagaaaaactaaagttaaagacaaagag aactga

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