Pimephales promelas (fathead minnow): 120487688
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Entry
120487688 CDS
T08155
Symbol
caprin1b
Name
(RefSeq) caprin-1b
KO
K18743
caprin-1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120487688 (caprin1b)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120487688 (caprin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
120487688
NCBI-ProteinID:
XP_039539905
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MPSATNGTRTVKSASPDLGSAPGSMNQITASNQLTGTQSEAMKQVLVVLEKKVRNMEKKK
SKLDDYQARNSKGERLNQDQLEALSKYQEVFHNLEFARELQKSFLALGQEIQKSVKKAAR
REQLQREDVEQKRLKRVLELQFLLDRLGDESVRQELLQGAGGPSLLTESDLASLDEFYKL
VGPERDQNIRLTDQYQEASQHLWELLEGKDKPVAGTTYKALNETLERVLQSGYFDRVQSH
QNGVCAEEEEQTAAVEASEAEEHPPEAEGEMTEEYAEPIPIEATEFVNRQFVSESTYSTG
DEQREEWSVETEVNNSMAQPVQTTPTPVVPELHPLPTVTPTPPSDPVIRQQVVQDLMAQM
QGPYNFMQDSMLDFDGQSLDPAIVLAQPMKPGSNMEMPPMVCQPAHPESRLAQPPAVGIQ
PEPTQISMVSPPETFSTPPPMYQSSHTADPRPQADSMDPSQASMPLTEQLPPVSQTQVIQ
PGSKPLHSSGINVNAAPFQSMQTVFNLNAPVPPVNDTDSMKLASQYQNSYNQGFNGQTQH
PVEQTDMPPEPLQSVVGAFHSQEQSLPNPSGHQPMSQQPGVQGNGFSRQAQSFYNSRGIS
RGGPRNARGMINGYRGPSNGFRGGYDGYRPPFSNAANAGYGQTQFSSPRDYSNGSYPRDG
YQQNYKRGAGQGTRGVARGNTQAMRS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggcaacaaatggcaccaggactgtgaagtctgccagcccagacttgggatcc
gctcccggatcaatgaaccaaatcacagccagcaaccagctgactggaacccagtccgag
gccatgaagcaggtgctggtggttctcgaaaagaaagtgcgcaatatggagaagaaaaag
agcaaacttgatgattatcaggccaggaacagcaaaggggaacgtctcaaccaggaccag
ctggaagccctgtctaagtaccaggaggtattccataaccttgagtttgcacgggagctg
cagaagagctttttggcattgggtcaagaaatccagaagagtgttaagaaagcagcacgt
cgtgagcagctccagcgtgaagatgtggaacagaaaaggctgaaacgggttctggagctg
cagttcctccttgatcgactcggggatgaaagcgtgcgacaagagcttctgcaaggagcc
ggaggaccttcactgcttactgagagtgaccttgcctccctggatgagttttacaagctt
gtggggcctgagcgtgaccaaaacatcaggttgactgaccagtatcaagaagcatcacag
cacttatgggaacttttggaggggaaggacaagcctgtagctggcacaacatataaagca
ctgaacgaaacgttggaacgggttttgcagagcggctactttgacagagtgcagtctcat
cagaacggagtttgcgcggaggaagaggagcaaacggctgcggtggaagcgtctgaagcc
gaggagcaccctcctgaagcggagggtgaaatgacggaagagtacgcagaacccattcca
atcgaggcgaccgagtttgtaaataggcagtttgtttcggagagcacatacagtactggc
gatgagcaaagggaggaatggagtgtggaaaccgaggtgaataactccatggcacagccg
gttcaaaccacccctacccctgtcgtcccagaactccacccactgcccacagtaacccca
acacccccttcagaccccgtgattagacagcaggtggttcaggatctcatggcacagatg
cagggtccatacaacttcatgcaggactccatgcttgattttgacggacagtctcttgat
ccggctattgtattggcacaacctatgaagccaggctcaaatatggagatgcctccgatg
gtgtgtcaaccagctcacccagagtctcgtctcgcacagcctccagctgttggcattcag
cctgaacccacacaaatctccatggtttctccaccagaaaccttttccacacctccccct
atgtatcagtcctctcacacagcggatccacgaccacaggccgactccatggatcccagt
caggcctccatgccattgacagagcagctccctcctgtctcccagacccaggtgatccag
cctggatccaaacccttacacagcagcggcatcaatgtcaacgcagccccgttccagtcc
atgcaaacggtgttcaaccttaatgcgcctgtcccaccagttaatgatacggactccatg
aagctggccagccaataccagaatagctacaaccagggttttaatggccagacgcagcac
cctgtggagcagacagacatgccaccagagccgctccagtctgtggtcggtgccttccat
tctcaagaacagtcacttccaaacccctctggccaccagcccatgtcccagcagcccggt
gtccagggcaacggcttcagccgccaggctcagtccttctacaacagcagggggatatct
cgtggcggtcctcgtaacgcgcggggcatgatcaacggctacagaggaccatccaatggg
ttcagagggggatatgatggttatcgcccacccttctcaaatgctgcaaacgctggatat
ggacaaacccagttcagttcgccgcgcgactattccaacggcagctatccgcgggatggt
taccaacagaactacaaacgtggagctggccaagggactcgaggggtcgcccgaggaaac
actcaagccatgcgctcttaa
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