Pimephales promelas (fathead minnow): 120487733
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Entry
120487733 CDS
T08155
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120487733 (chd2)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120487733 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
120487733
NCBI-ProteinID:
XP_039540006
LinkDB
All DBs
Position
Unknown
AA seq
1805 aa
AA seq
DB search
MMKSKSKKQDEGSTQSNASSNSASEESNRSGSESGSQSESEQGSDRARSRRSESNSTSDS
ESHFESGSESTGSKSRQNSTQVKDKPVRKKDNLADVKKMWEEHPDIYGVRRSSRSRQEPA
RLNIGAEGSSDSEGESPKRKSPRQKKKENTWKDDDSNDEEDVEEEASSSESEQEEKKVRS
RRLPARRPQTKSSSGKQQSQKGRKQRKQESSEEDDDDDDDDDDDDDDEEDTPKRQTRRRA
ATKVSYKEDQNDFETDSDDLIEMDGAEEQQDDDSETIEKVLETRIGKKGATGACTTLYAI
EENGNPGADFDPEKEEGETQFLIKWKGWSYIHNTWESVDSLTQQKVKGIKKLENFKKKND
ELNAWLNKASLEDLEYYNCQQELTNDLSKQFQILERVIATRTGKSQAHSDLPSHKTSSTE
PEYLCKWMGLPYAECTWEDGGLIKKKFEACVDSFLHRNACKTIPSKDCKVLKQRPRFQPL
KKQPSYIGNETLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQH
QLYGPFIVVVPLSTLTSWQREFETWAPDMNVVVYLGDVTSRKTIRDYEWIHQQTKRIKFN
ALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQ
NSLKELWSLLHFLMPDKFESWEDFEDEHGKGRDNGYQSLHKVLEPFLLRRVKKDVEKSLP
AKVEQILRVDMSAQQKQYYKWILTRNFKALSKGTRGSSSGFLNIVMELKKCCNHGFLIKQ
PEDGENDKVEEHLQSLVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILADYLAMK
RYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN
PQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTV
LDNNSANSNSNPFNKEELTAILKFGAEDLFKEPEGEESEPQEMDIDEILRLAETRESDQG
SSATDELLSQFKVANFTMDESAPDLEERAVRDWDDIIPEDQRKKVEEEQKQKEMEDIYML
PRSRSSNKRAQANDSDSDVGSKLKHRSSGSDSETDDSEDDKRPKRRGRPRARKNNVEGFT
DAEIRRFIKAYKKFGAPLERLEAIARDSELVDKSIADLKRLGELVHNSCVTAVQEHEEHL
KENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKSVPPNPAERNKFQLTCRV
KTPHFDVDWDIHDDTQLLLGIYEHGYGNWDLIKTDPDLKLSEKILLDDPDKKPQGKQLQM
RADYLLKMLKKEQESQDAVKAGDEIKTKKRKPRKKNKAPNNDLVNENASPRLSDNPSEEG
EVKDDGAEKSPTKKKQKKDNKENKEKTGTTKKEKEADKDKKRSKSKKEKAKPGGKGKKAQ
GPVHITAGSDPVPIGEEDDELDQETFSICKERMRPVKKALKQLDKPDEGLSVQEQLQHTR
TCLLKIGDRITECLKTYNDPEHVKIWRRNLWIFVSKFTEFGARKLHKLYKMAQKKRSQEE
EKEQKKKDDPSRKKPFRPEPSGSSRDSTGAQPTTKPHPQPGPLPHSHHRDQYNHPNKRHF
PNDDRGDWQRDRKYNYPGNSSQPWQGDRHHPYESHRYKDHHYGDRRPHGDYRSSGGYRNS
SSPRKRAYDQYGNDRDHRGHRDYYDRHPDPKRRRSDEYRSPNYHQGGGGHPQDFRRMPDH
RSPPGNHGPMGPDHYRPFHPDKPPPLIDPRSPQSQKSPLEPISPALERTAEQKPVTDFNW
NNRKT
NT seq
5418 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagagtaagagtaaaaagcaggatgaaggctcaactcaaagcaatgcttccagc
aattcagcatcagaggaatctaaccgctctggatcagagtctgggagtcagtcggagagc
gagcagggaagcgatagagctcgttcccggcgttccgagtccaacagcacctccgattcc
gagagccactttgagtcagggagtgaatccactgggtccaaatcccgccagaactcaaca
caggtcaaagacaaaccagtcaggaaaaaagacaacctggccgacgtgaagaagatgtgg
gaggaacatccagatatttacggtgttagaagatccagtcgcagcagacaagagcctgcg
cgcctcaacattggagctgagggcagcagtgattcagagggggaaagtcccaaaagaaaa
agcccacggcagaaaaagaaagaaaatacctggaaagatgatgactcaaatgacgaagag
gatgttgaggaagaggccagcagttcagagagtgagcaggaagagaaaaaagttagatcc
agacgactccctgctagaagaccacagaccaagtcatcttctggcaagcaacagtcgcaa
aagggacggaaacagaggaagcaggaatcctcagaggaggatgatgatgatgacgacgat
gatgacgatgacgatgatgatgaagaggataccccaaaaagacaaacaaggcggcgagca
gcaactaaagtcagttacaaggaggaccagaatgatttcgagacggactctgatgacctt
atcgaaatggatggagccgaggagcaacaggatgacgacagtgagacgatcgagaaggtc
cttgaaaccaggattggcaagaaaggagccactggagcttgcacaaccctctatgccatt
gaggaaaatgggaaccctggagcagactttgaccctgagaaagaggaaggggaaactcag
ttcctcatcaagtggaaaggctggtcctacatccacaacacctgggagagcgtggactcc
ctcactcagcagaaagtcaaagggatcaagaagctggaaaacttcaagaagaaaaacgat
gagcttaacgcttggttgaacaaagcatcactggaagatttagaatattacaattgccag
caagagctaaccaatgacctgagcaagcaattccagatattagagagagtgatcgcaaca
agaacagggaaatcacaagctcattcagatttaccttcccataaaacctcttccactgag
ccagagtatctgtgtaagtggatggggctgccgtatgcagagtgcacatgggaggatggc
ggattaatcaaaaagaaattcgaagcctgcgttgatagtttcctacacagaaatgcttgc
aagacaatcccttccaaagactgcaaggtgttgaaacagaggccaagatttcagcccttg
aagaagcagccttcttatattggaaatgagacccttgaactcagagattaccagttagat
ggagtgaactggctcgcccactcctggtgcaggtgtaacagtgttatcttggctgatgaa
atgggcctgggaaagaccattcagactatctccttcctgtcctacctatttcatcagcac
cagctttatggtcccttcatcgtggtggttcctctgtcaacccttacctcctggcagagg
gaatttgagacttgggctccagatatgaacgtagtggtgtacctaggagacgttacaagt
agaaagacgatccgggactacgaatggatccaccagcagacaaaaaggatcaagttcaat
gcacttttgaccacatatgaaattctactgaaggacaagggagtgctggggaatataaac
tgggctttccttggagttgatgaagctcaccggcttaagaatgacgactcgctgctatat
aaaactctgatcgactttcggtccaatcacaggctgctcatcactgggaccccacttcag
aactcactcaaagagctgtggtcccttctgcactttcttatgcctgacaagtttgagtcc
tgggaggattttgaggatgagcatggtaaaggcagggataatggttatcagagcctacat
aaagttctggaacctttcctactgcgtcgtgtcaagaaagacgtggagaaatccttgcct
gctaaagtggagcaaatcctcagagtcgacatgtctgcccagcaaaaacagtactacaaa
tggatactaacaagaaacttcaaagccttgtccaaaggcaccagaggcagctcttctggc
tttcttaacatcgtcatggagctgaagaagtgttgtaatcatggtttcctcatcaaacaa
ccagaggatggtgagaatgataaagtagaagagcacctacagtccttggtgcgtggcagc
gggaaactggttctcctggacaagcttctcacacgactgagggagagaggcaaccgcgtg
ctcatcttctctcagatggtccgcatgttggacatccttgctgattacctggctatgaaa
cgatatccgttccagcgtttggacggctccatcaagggagaaatccgaaaacaagcactg
gaccactttaatgcagaaggctctgaggacttttgtttcctgctgtccacccgagctgga
gggcttgggattaacctggcctctgccgacacagtggttatctttgactcggactggaac
ccacagaatgatcttcaagcccaggccagagcccacaggattggccagaaaaagcaagta
aatatctatcgtctggtcacaaaaggcactgtggaggaagacattattgaaagagcgaaa
aagaagatggttctagaccatcttgtcattcagagaatggacacaactgggcgaaccgta
ctggataacaactctgcaaattcaaattcaaaccccttcaataaagaagaactgacagca
atcttgaagtttggagcagaggatctgttcaaggaacctgagggagaggaatcagaacca
caggaaatggacattgatgagatcctgcggcttgctgaaaccagagagagtgatcaggga
tctagtgccaccgatgagcttctgtcacagtttaaggtggctaactttaccatggatgaa
agcgcaccagatctcgaggagagggctgtgcgtgactgggatgatataattccagaggat
cagcggaaaaaggtggaggaagaacagaagcagaaggagatggaagacatctacatgctg
cccagaagcagaagctccaacaagagggcgcaggctaatgacagcgacagtgacgtggga
tctaaactgaagcacaggtcctcgggttcagatagtgaaacggatgacagcgaggatgac
aaacgaccaaagcggagaggcaggccgagagctcgcaaaaacaacgtggagggatttact
gacgcagagatccgcaggttcattaaggcatacaagaagtttggagctccgcttgagagg
ttggaggcgattgcccgtgactctgagctggtggataagtccatcgcagacctgaagcga
ctgggggaactggtacacaacagctgtgtgactgcagtgcaggagcatgaggagcacttg
aaagaaaaccctgtggaagctaaagggccgggaaaaagacgaggcattaacataaagatc
tctggggttcaggtcaatgcgaagtccattatccagcacgaagaggagtttgaaccgctg
cataaatctgtgcctccaaatcctgctgaaaggaacaaatttcagctgacctgtcgggtc
aagactccacactttgacgtagactgggatattcatgatgacacacagctgttattgggt
atctatgagcatggctacggcaactgggacctgatcaagaccgaccctgatctcaaactt
tctgagaagattctcctagatgaccctgataagaagcctcagggaaagcagttgcagatg
agagcagactacttgcttaagatgctgaagaaggagcaagaaagccaagatgctgttaaa
gcaggagatgagatcaaaaccaaaaagaggaaacctcgaaagaagaacaaggcccctaac
aatgatctggtcaatgaaaacgcctctcctcgtctctccgacaacccatcagaagaggga
gaggtgaaggatgatggagctgaaaaatcacccacaaagaagaaacagaaaaaggataac
aaagaaaacaaagaaaaaacaggaactactaaaaaagaaaaggaggcagacaaagacaaa
aagcgctccaagtccaaaaaagagaaggccaaaccaggaggaaaaggaaagaaagctcag
ggccccgtgcacattactgcaggaagtgatcctgtaccaattggagaggaagatgatgag
ctggaccaggaaacatttagcatttgcaaagagagaatgaggccggtaaagaaggctctg
aagcagttggataagccagacgaggggctgtcggtacaggaacagttacagcacactcgt
acctgcctattgaagataggagaccgcatcacagagtgccttaaaacgtacaatgaccct
gagcacgtcaagatctggcgcagaaacctctggatttttgtgtccaaatttactgagttt
ggtgcccggaaactgcacaagctgtataagatggctcagaagaagcgctcacaggaggaa
gagaaagagcaaaagaagaaggatgatccttccaggaaaaaacccttcagacctgaaccg
tctggatctagtcgagactctacaggtgcccagcccacaacaaaaccccatcctcagcct
ggacctctccctcactcccaccacagagatcaatacaaccatcccaataaaaggcacttt
cctaatgatgataggggagattggcaaagagaccgtaaatacaactacccagggaacagc
agtcagccctggcaaggggatcggcatcacccatatgagagtcacagatacaaggaccac
cactatggcgaccgtcgccctcatggtgactaccgcagctcaggaggttaccgtaacagc
agttcccctcgcaaacgagcctacgaccagtatggcaacgatagagatcatcgcggccat
cgagactattatgacagacatcctgaccctaaaaggaggcgttcggatgagtaccgctcc
ccgaactaccaccaagggggaggagggcatccacaggacttcagaaggatgcctgaccac
agaagcccccctggaaaccatggccccatggggcctgatcactaccgccccttccaccca
gacaaacccccacccctgattgacccccgttcccctcagtctcagaaatccccccttgag
ccgatctcgcctgctttggaaagaactgcagagcagaaacctgtgacggactttaattgg
aacaacaggaagacgtga
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integrated database retrieval system
