Pimephales promelas (fathead minnow): 120487807
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Entry
120487807 CDS
T08155
Symbol
colgalt1b
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00310
Lysine degradation
pprm00514
Other types of O-glycan biosynthesis
pprm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120487807 (colgalt1b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120487807 (colgalt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pprm01003
]
120487807 (colgalt1b)
Enzymes [BR:
pprm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120487807 (colgalt1b)
Glycosyltransferases [BR:
pprm01003
]
O-Glycan biosynthesis
O-linked Gal type
120487807 (colgalt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
120487807
NCBI-ProteinID:
XP_039540140
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MHLLCFFVLLLWSGPVRSYFPEERWSPESALLAPRVLLALVCRNSAHSLPQVLGAIDRLN
YPKDRMGVWVATDHNSDNTSAILREWLINVQSFYHYVEWRPQEEPSAYEDESGPKHWTNL
RYEHVMKLRQAALDTAREMWADYFLVVDCDNLLTNRDVLWKLMRENKTIVAPMLESRAAY
SNFWCGMTSQGYYRRTPAYMPIRRQERTGCFAVPMVHSTLLLDLRKQASRQLAFFPPHPD
YSWAFDDIIIFAFSARMADVQMYLCNRETYGYFPVPLRSQNTLQDEADSFLHSQLEIMVR
NPPTEPSVYLSLPHKQPDKMGFDEVFMINLLRRSDRRDRMLRTLYEQQIECKIIAAVDGK
ALNSSQVEALGIKMLPGYSDPYHGRPLTKGELGCFLSHYNIWTEIVDRGLKTSLVIEDDL
RFEIFFKRRLQNLMYEIQSQRLDWDLIYIGRKRMQVDRPEKSVPGIHNLVEADYSYWTLG
YMISLQGAQKLLRAEPLKKMLPVDEFLPVMYNKHPIEEYMSHFQRRDLRAFSAEPLLVYP
SHYTGDPGYVSDTETSTVWDNETVHTDWDRARSRKSREQEELSSGAQNSDVLQSPLDSTA
RDEL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgctgtgtttctttgtcctgctgctgtggagcggcccggtgcgcagttatttc
ccggaggagcgctggagcccggagtccgcgttgctcgcgccgcgggtgctgctcgcgctg
gtgtgccgcaactccgcgcactctctcccgcaggtcctcggcgccatcgaccgcctcaac
taccccaaagaccgcatgggtgtatgggtggccacggatcataactccgacaacacttcc
gctatcctgcgggaatggctgatcaacgtccagagcttttatcactatgtggagtggaga
ccacaggaggagcccagcgcctacgaggacgagagtgggccaaagcactggacgaatctc
cgctacgagcacgtgatgaagctgcgtcaggcggcgctggacacggcccgagagatgtgg
gccgactacttcctggtggtggactgtgataatctgttgaccaacagagacgtgctgtgg
aagctgatgcgcgagaacaagacgatcgtggcgccgatgctggagtccagagccgcgtac
tcaaacttctggtgcggcatgacctcgcagggttattacaggcgtacgccggcctacatg
cccatccggcggcaggagaggacgggctgcttcgctgtacccatggtgcactccacgctc
ctgctggacctgaggaaacaagcgtcccgtcagctggccttcttcccgccgcaccccgac
tacagctgggccttcgatgacatcatcatcttcgccttctccgcgcggatggcagacgtt
cagatgtacctctgcaacagagagacttatgggtatttccccgtgcccctgcgctcccag
aataccctgcaggacgaggcggacagctttctgcactcgcagctggagatcatggtgcgc
aatcccccgacggagccgtccgtctatctctctcttcctcacaaacagcccgataaaatg
ggctttgatgaggtgttcatgataaacctgctgagacgctcggaccgcagggatcgtatg
ctgaggactctctacgaacagcagatcgagtgcaagatcatcgccgctgtagatggcaag
gcgctgaacagcagtcaggtggaggcgctggggatcaagatgctccccggatacagtgac
ccgtatcacggccggccgctcaccaaaggagaactcggctgctttctctcgcactacaac
atctggacagagatcgtggatcgaggactgaagacgtctctggtgatcgaggacgatctg
cgcttcgagattttcttcaagcggcgcctgcagaatctgatgtatgagatccagtctcag
cggctagactgggacttgatttacatcggacgcaagcggatgcaagtggaccgtccggag
aaatcagttcccggaatccataacctggtggaggcggattattcgtactggacgctggga
tacatgatctcgttacagggagcgcagaagctgctgcgggccgaaccgctgaagaagatg
ctgcctgtggacgagttcctgcccgtcatgtacaacaaacaccccattgaggagtacatg
tcccacttccagcgacgggacctgcgggcgttctcggccgagcctctgctggtttacccc
tcgcactacaccggcgacccgggatacgtcagcgacaccgagacctccaccgtctgggac
aacgagaccgtccacaccgactgggaccgggccagatcccgcaagagccgcgagcaggag
gagctgagcagcggagcacagaactcagacgtcctgcagtcgccgctcgacagcacggcg
cgagacgagctctaa
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integrated database retrieval system
