Pimephales promelas (fathead minnow): 120487867
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Entry
120487867 CDS
T08155
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03420
Nucleotide excision repair
pprm04115
p53 signaling pathway
pprm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120487867 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
120487867 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
120487867 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120487867 (ddb2)
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120487867 (ddb2)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120487867 (ddb2)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
120487867 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR3_2nd
ANAPC4_WD40
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_Vps41
PEP5_VPS11_N
MIOS_WD40
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
120487867
NCBI-ProteinID:
XP_039540222
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MARGRAQTDSTASKQTKNVKKRPNEEPPQTLSKKLKAKQKGETAPKADTYIQASVKWTGG
QKKVGQTSILHYIYKSTLGQSIHSQLRQCLQEPFIRSLGAYQLHRTASPFDRRVTCLEWH
PTHPTTVAVGSKGGDIILWDYDVLNKRTFIQGKGAGDFIGGMKFCPTDVSKIFVASGDGT
ISLQSFEGSQSQILSRTPDCGHDHHDLCYWYCCVDVSVSRQMLATGDNTGRLLLLGMDGQ
EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRKMKDKSSYIAEMPHEKPVNS
AYFNPTDCTKLLTTDQRNQIRVYCSYDWTKPDQIIIHPHRQFQHLTPIKATWHPMYDLIV
AGRYPDDQVLVNDKRTIDVYDANSGDLVHQLRDPNAAGIISLNKFNSTGDVLASGMGYNI
LIWNREDTLNRVTWTQTVEDSGGRAGTSRSQRSARQRANRDGRAAANDAKLKKKLSSLSS
TETKSKTKSKTECKTTKVKKK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaggaagggctcagacggactcaactgcttcgaagcagacgaagaacgtcaag
aaaagaccgaatgaagaacctcctcaaacactctccaaaaagctaaaggccaaacaaaaa
ggcgagacggcaccaaaagccgacacctacatacaagcaagtgtgaaatggactggaggt
caaaagaaagtgggccaaacaagtatccttcactacatttacaaaagcaccttgggacag
agcatccattctcaactgcgccagtgtctgcaagagcctttcatacgctctcttggagcc
taccaactccaccgcacagccagcccatttgaccggagagtcacttgtctggaatggcat
cccacccatcccaccactgttgcagtcggctccaaaggtggagacatcatcctctgggat
tacgatgtgctgaataagagaactttcatacaggggaagggagctggtgactttattggg
gggatgaagttctgccccacagatgtgtccaaaatctttgtcgcttctggtgatggcaca
atcagcttgcagagttttgagggctctcaaagtcagatattgtctcgaaccccagactgt
ggccatgaccaccatgatctttgttactggtactgctgtgtggacgtgtctgttagccgt
cagatgcttgccactggggacaataccggaagacttctcctgctcggcatggatggacaa
gaaattttcaaagagaagctgcacaaagccaaagtgacccatgcagaatttaaccctcgt
tgtgactggctgatggcaacgtcctctgttgatgctacggtcaagctgtgggacctccga
aaaatgaaagacaaaagcagttatattgctgaaatgcctcatgagaaacctgtcaattct
gcatactttaatccgacagactgcaccaagctccttactacagaccagaggaaccagatc
agggtatattgctcatatgactggactaaacctgatcaaataattattcatcctcatcgg
cagttccagcacttaacgcccatcaaggcaacctggcatcccatgtatgacctcatcgtt
gctggccgctacccagatgatcaagtattagtcaatgacaagagaactattgacgtttat
gatgccaacagtggtgatcttgtgcaccagctgagagaccccaatgctgctggtatcata
tctctcaacaaattcaattcaactggggatgtgctggcttctggaatgggctataacatt
ttaatctggaaccgagaggacacactgaaccgtgttacttggacacagacagtggaggac
agtggaggcagagctggaacctccagatctcagcgcagcgcccgacagcgcgcgaataga
gatggaagagcagctgctaatgatgccaagctcaagaaaaagctgtcatcattgtcttca
acagagaccaagtcaaagaccaagagcaagaccgaatgcaagacaacaaaagtgaagaaa
aagtga
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integrated database retrieval system
