Pimephales promelas (fathead minnow): 120487919
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Entry
120487919 CDS
T08155
Name
(RefSeq) neuronal PAS domain-containing protein 3-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120487919
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120487919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
120487919
NCBI-ProteinID:
XP_039540284
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
SLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPP
GRGLLSQGGGAEDGASSASSSSHSETPEPVESSSPSLLSPDNTLERSFFIRMKSTLTKRG
VHIKSSGYKVIHVTGRLRIRMALTHSRSVPNQIMGMVVVAHALPPPTINEVRIDCQMFVT
RVNMDLNIVYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRQSHLDLMNKGQSVTKY
YRWIQKNGGYIWIQSSATIAINAKNANEKNIIWVNYVLSNPEYKDTPMDIAQLPNLPEKA
SESSETSDSESDSKENSEDNENSKSGGKGNQSSENSEDPETDSKKQTGRPPEQEMRRQEE
GDSSSNPESQDSDDSLEPSDCETDHKEGRLGGLHIKVERYGDGEVEELQDSPSSCSSSSE
EEEDDAEDIVKDCSSGRELSGPAMSKHQKRKKRRKKQKWDDSRQRLRLSPSAAATPSPGG
LDPTLGDQPPLLLPPSPTSSSVLKIKTEMSEPINFDNDSSIWNYPPNREISRNESPYSMT
KPHDTFPSPPPAGLQVSIPDSVLTPPGAEGGGGSRKPNFNGNSSGGNNNSAPTSVSSATP
GSLVLPSSSTSADPLSPPLSASPRDKQQGTPTSSGSLLYTSDLEALQRLQAGNVVLPLVH
RVTGTLAATSTASPRVYTTGTIRYAPADVSLAMQGNLLPNAHTAVNFVDGPGFGIDPKTP
MEMLYHHVHRLNMSTPFGAAVSGAGLTQMPAANVFTTAEGLFSTLPFPVYSNGIHNTQTL
ERKED
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
tccctggatggatttgtatttgcactaaacaaggaggggaggtttttgtacatctcagag
acagtgtccatatacctggggctttcacaggtggaactgacgggcagcagcgtgtttgac
tacgttcacccgggcgatcacgtggagatggcggagcagttggggatgaagcttcctccg
gggagagggctcctgtctcagggcggcggggctgaggatggggccagctctgcctcctct
tcctctcactctgagacacctgagccagtggagtcgagcagccctagtcttctgtcgccg
gataacactctagaacgttccttctttatccgaatgaagtccacactcaccaagagaggc
gtccacatcaagtcttctggatacaaggtcatccacgttaccggcaggctgcggataaga
atggcattaacacacagtcgttcggtacccaatcaaatcatgggcatggtcgtggtggca
cacgcacttcctccgccaaccatcaacgaggttcggatcgactgccagatgtttgtcaca
cgggtcaacatggatctcaacatcgtctactgtgaaaacagaatcagcgactacatggac
ctgacacctgtggacattgtagggaaaagatgttatcacttcattcacgcagaggacgtg
gaaggcattcggcaaagccatttagacctaatgaataaaggtcaaagtgtgacaaagtat
taccgctggattcagaagaatggaggttatatctggatccagtccagtgccactattgca
atcaacgccaagaacgccaatgaaaaaaacatcatctgggtcaactatgtactgagtaat
cccgagtacaaagatacacctatggacattgcacagctgcctaacctgccagagaaagca
tcagagtcctctgaaacatctgattctgaatccgactccaaggagaattcagaagacaac
gaaaactccaagtcaggtgggaaggggaatcaatcttccgagaacagtgaagatccagag
acggacagtaagaaacagacgggccggccgccagagcaagagatgagacgacaggaggaa
ggggacagttccagcaatccagaaagtcaggacagtgatgatagcttggaaccttctgac
tgtgaaaccgaccacaaggagggccgcttgggtggtttacacataaaggtagagcgctac
ggtgacggcgaggtggaggaattgcaagactcgccttcctcttgctcctcctcctcggaa
gaagaagaggatgacgcagaagatatcgtgaaggactgcagcagcggacgagagctgagc
gggccggcgatgagtaaacaccagaagagaaagaagaggaggaaaaagcagaagtgggat
gatagtcgccaacgtctccgtctgtctccctcggcggctgccacccccagccctggcggc
ctggaccccaccctcggagaccagcctccccttctgcttccaccctccccgaccagttcc
tctgtgctgaagatcaagactgagatgtcggaaccgataaactttgacaacgacagcagc
atctggaactacccacccaatcgagagatctcccgtaacgagtccccctacagcatgacg
aaaccccacgacaccttcccgtcccccccgcccgccggcctgcaggtgtccattcccgac
tccgtcctcactccgcctggtgctgagggtggaggaggcagcagaaagcccaatttcaat
ggcaacagtagcggcggcaacaataacagcgcccccacctccgtgtccagcgcaactcca
ggcagcttggttcttccttccagttcaacctccgctgacccgctctccccacctctctct
gcctcgccacgggacaagcagcagggtacgcccacctcctctggttccctgctctacacc
agtgatctggaagccctgcagaggttgcaagcgggaaatgtggtgcttccattggtgcac
agagtcacaggaacgctcgccgccacgagcacggcatccccacgagtctacaccactgga
acgatccggtacgccccggcagatgtcagcctggccatgcagggcaacctcctgcctaac
gcccacaccgctgtgaactttgtcgatgggcccggtttcggcatagaccccaagacaccc
atggagatgctttaccatcacgtgcaccggctcaacatgtccacccccttcggggccgca
gtcagcggagccgggctcacgcagatgcctgctgctaacgtcttcaccacagcggaggga
ctcttctccacgcttccgtttcccgtctacagcaacggcatccacaacacacagactctg
gagcgcaaggaggattga
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